Package | Description |
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Contains all Image related stuff as the Icy image data structure, ColorModel, ColorSpace, ColorMap, Image tools...
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Contains all ROI (Region Of Interest) related classes and tools
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Contains all 2D ROI classes included in the kernel
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Contains all 3D ROI classes included in the kernel
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Contains all 4D ROI classes included in the kernel
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Contains all 5D ROI classes included in the kernel
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Modifier and Type | Field and Description |
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protected |
internals
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Constructor and Description |
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( image,
maskXY)
Deprecated.
Use instead
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( image,
maskXY,
int channel)
Create a new ImageData iterator to iterate data through the specified
BooleanMask2D and C dimension. |
Modifier and Type | Field and Description |
---|---|
<,BooleanMask2D> |
Boolean mask 2D array.
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Modifier and Type | Method and Description |
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()
Deprecated.
Use instead.
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(boolean inclusive)
Deprecated.
Use instead.
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()
Deprecated.
Use instead.
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(boolean inclusive)
Get the object representing the roi.
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(int z,
boolean inclusive)
Get the object representing the roi for the specified Z position.
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(int z,
int t,
boolean inclusive)
Get the object representing the roi for the specified Z,T position.
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(int z,
int t,
int c,
boolean inclusive) |
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(int z,
int t,
int c,
boolean inclusive) |
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(int z,
int t,
int c,
boolean inclusive) |
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(int z,
int t,
int c,
boolean inclusive)
Returns the object representing the XY plan content at specified Z, T,
C position.
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[] |
()
Return an array of boolean mask representing each independent component of the current
mask.
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( booleanMask)
Compute exclusive union operation with specified mask and return result in a new mask
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static |
( mask1,
mask2)
Build resulting mask from exclusive union of the mask1 and mask2.
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static |
(<BooleanMask2D> masks)
Build global boolean mask from exclusive union of all specified mask
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( bounds,
boolean[] mask)
Compute exclusive union operation with specified mask and return result in a new mask
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static |
( bounds1,
boolean[] mask1,
bounds2,
boolean[] mask2)
Build resulting mask from exclusive union of the mask1 and mask2:
mask1 xor mask2 = result
################ ################
############## ############## ## ##
############ ############ #### ####
########## ########## ###### ######
######## ######## ################
###### ###### ###### ######
#### #### #### ####
## ## ## ##
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static |
(<ROI2D> rois)
Deprecated.
Use instead.
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static |
( mask1,
mask2)
Deprecated.
Use instead.
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static |
(<BooleanMask2D> masks)
Deprecated.
Use instead.
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static |
( bounds1,
boolean[] mask1,
bounds2,
boolean[] mask2)
Deprecated.
Use
instead.
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static |
([] rois)
Deprecated.
Use instead.
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( booleanMask)
Deprecated.
Use instead.
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( bounds,
boolean[] mask)
Deprecated.
Use instead.
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static |
(<ROI2D> rois)
Deprecated.
Use instead.
|
static |
( mask1,
mask2)
Deprecated.
Use instead.
|
static |
( bounds1,
boolean[] mask1,
bounds2,
boolean[] mask2)
Deprecated.
Use
instead.
|
static |
([] rois)
Deprecated.
Use instead.
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( booleanMask)
Compute intersection with specified mask and return result in a new mask
|
static |
( mask1,
mask2)
Build resulting mask from intersection of the mask1 and mask2.
|
static |
(<BooleanMask2D> masks)
Build global boolean mask from intersection of all specified mask
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( bounds,
boolean[] mask)
Compute intersection with specified mask and return result in a new mask
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static |
( bounds1,
boolean[] mask1,
bounds2,
boolean[] mask2)
Build resulting mask from intersection of the mask1 and mask2:
mask1 intersect mask2 = result
################ ################ ################
############## ############## ############
############ ############ ########
########## ########## ####
######## ########
###### ######
#### ####
## ##
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static |
( mask1,
mask2)
Deprecated.
Use instead.
|
static |
(<BooleanMask2D> masks)
Deprecated.
Use instead.
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static |
( bounds1,
boolean[] mask1,
bounds2,
boolean[] mask2)
Deprecated.
Use instead.
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(int z)
Returns the 2D boolean mask for the specified Z position
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(int z,
int t)
Returns the 2D boolean mask for the specified Z, T position
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(int z,
int t,
int c)
Returns the 2D boolean mask for the specified Z, T, C position
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( mask)
Subtract the specified mask from current and return result in a new mask.
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static |
( mask1,
mask2)
Build resulting mask from the subtraction of mask2 from mask1.
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( bounds,
boolean[] mask)
Subtract the specified mask from current and return result in a new mask.
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static |
( bounds1,
boolean[] mask1,
bounds2,
boolean[] mask2)
Build resulting mask from the subtraction of mask2 from mask1:
mask1 - mask2 = result
################ ################
############## ############## ##
############ ############ ####
########## ########## ######
######## ######## ########
###### ###### ######
#### #### ####
## ## ##
|
|
( booleanMask)
Compute union with specified mask and return result in a new mask
|
static |
( mask1,
mask2)
Build resulting mask from union of the mask1 and mask2.
|
static |
(<BooleanMask2D> masks)
Build global boolean mask from union of all specified mask
|
|
( bounds,
boolean[] mask)
Compute union with specified mask and return result in a new mask
|
static |
( bounds1,
boolean[] mask1,
bounds2,
boolean[] mask2)
Build resulting mask from union of the mask1 and mask2:
mask1 + mask2 = result
################ ################ ################
############## ############## ################
############ ############ ################
########## ########## ################
######## ######## ################
###### ###### ###### ######
#### #### #### ####
## ## ## ##
|
static |
(<ROI2D> rois)
Deprecated.
Use instead.
|
static |
( mask1,
mask2)
Deprecated.
Use instead.
|
static |
(<BooleanMask2D> masks)
Deprecated.
Use instead.
|
static |
( bounds1,
boolean[] mask1,
bounds2,
boolean[] mask2)
Deprecated.
Use instead.
|
static |
([] rois)
Deprecated.
Use instead.
|
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( booleanMask)
Deprecated.
Use instead.
|
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( bounds,
boolean[] mask)
Deprecated.
Use instead.
|
static |
(<ROI2D> rois)
Deprecated.
Use instead.
|
static |
( mask1,
mask2)
Deprecated.
Use instead.
|
static |
( bounds1,
boolean[] mask1,
bounds2,
boolean[] mask2)
Deprecated.
Uses
instead.
|
static |
([] rois)
Deprecated.
Use instead.
|
Modifier and Type | Method and Description |
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boolean |
( booleanMask)
Return true if mask contains the specified 2Dmask.
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boolean |
( booleanMask,
int z)
Return true if mask contains the specified 2D mask at position Z.
|
boolean |
( booleanMask,
int z,
int t)
Return true if mask contains the specified 2D mask at position Z, T.
|
boolean |
( booleanMask,
int z,
int t,
int c)
Return true if mask contains the specified 2D mask at position Z, T, C
|
void |
( booleanMask)
Deprecated.
Use instead.
|
|
( booleanMask)
Compute exclusive union operation with specified mask and return result in a new mask
|
static |
( mask1,
mask2)
Build resulting mask from exclusive union of the mask1 and mask2.
|
static |
( mask1,
mask2)
Deprecated.
Use instead.
|
|
( booleanMask)
Deprecated.
Use instead.
|
static |
( mask1,
mask2)
Deprecated.
Use instead.
|
|
( booleanMask)
Compute intersection with specified mask and return result in a new mask
|
static |
( mask1,
mask2)
Build resulting mask from intersection of the mask1 and mask2.
|
static |
( mask1,
mask2)
Deprecated.
Use instead.
|
|
( mask)
Subtract the specified mask from current and return result in a new mask.
|
static |
( mask1,
mask2)
Build resulting mask from the subtraction of mask2 from mask1.
|
|
( booleanMask)
Compute union with specified mask and return result in a new mask
|
static |
( mask1,
mask2)
Build resulting mask from union of the mask1 and mask2.
|
static |
( mask1,
mask2)
Deprecated.
Use instead.
|
|
( booleanMask)
Deprecated.
Use instead.
|
static |
( mask1,
mask2)
Deprecated.
Use instead.
|
void |
( booleanMask)
Deprecated.
Use instead.
|
boolean |
( booleanMask)
Return true if mask intersects (contains at least one point) the specified 2D mask.
|
boolean |
( booleanMask,
int z)
Return true if mask intersects (contains at least one point) the specified 2D mask at
position Z.
|
boolean |
( booleanMask,
int z,
int t)
Return true if mask intersects (contains at least one point) the specified 2D mask at
position Z, T
|
boolean |
( booleanMask,
int z,
int t,
int c)
Return true if mask intersects (contains at least one point) the specified 2D mask at
position Z, T, C
|
void |
( booleanMask)
Deprecated.
Use instead.
|
void |
( booleanMask)
Deprecated.
Use instead
|
Modifier and Type | Method and Description |
---|---|
static |
(<BooleanMask2D> masks)
Build global boolean mask from exclusive union of all specified mask
|
static |
(<BooleanMask2D> masks)
Deprecated.
Use instead.
|
static |
(<BooleanMask2D> masks)
Build global boolean mask from intersection of all specified mask
|
static |
(<BooleanMask2D> masks)
Deprecated.
Use instead.
|
static |
(<BooleanMask2D> masks)
Build global boolean mask from union of all specified mask
|
static |
(<BooleanMask2D> masks)
Deprecated.
Use instead.
|
Constructor and Description |
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( bounds,
[] mask)
Build a new 3D boolean mask with specified bounds and 2D mask array.
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( mask)
Deprecated.
Create a ROI2D Area type from the specified .
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Modifier and Type | Method and Description |
---|---|
void |
( mask)
Set the mask from a BooleanMask2D object
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Constructor and Description |
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( mask)
Create a ROI2D Area type from the specified .
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Modifier and Type | Method and Description |
---|---|
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(int z,
boolean inclusive) |
Modifier and Type | Method and Description |
---|---|
void |
( rect,
[] mask)
Set the 3D mask from a 2D boolean mask array
|
Modifier and Type | Method and Description |
---|---|
|
(int z,
int t,
boolean inclusive) |
Modifier and Type | Method and Description |
---|---|
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(int z,
int t,
int c,
boolean inclusive) |