Current number of protocols: 15b
Complete detection protocol with 3 outputs: excel, binary, and detection screenshot
Display detections performed in 2 channels and colocalized detection.
This version automatically name the xls and binary output files
This protocol duplicates the input sequence as well as the ROI that are selected by the user
This protocol crops the input sequence to the bounding box of each ROI (thus producing a list of cropped seque...
Extract channels from a sequence to display or process them individually
This protocol first extracts the cell nuclei from a given fluorescence channel (full labeling), and grows a co...
This protocol performs a smooth on the image.
This protocol uses a "folder loop" block to read every tif file in the specified folder and run an automated t...
Perform a median filter on the active sequence using the ImageJ rank filter plugin, and convert the result bac...
This protocol computes the optical flow of a 2D+T sequence. The results are displayed with flow arrows pain...
This is the first protocol with spot detection for test purposes.
Threshold with multiple ROIs.xml
Tracks a cell in a 2D video using active contours, and produces a list of ROI where intensity is measured and ...