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lgelman
25 Jul 2014 16:53
Very nice, but I miss the option "Stack Histogram", and also the possibility to segment each plane independently (and not according to the values found for the Slice and the Time point indicated in the dialog box).
Thanks a lot!
Laurent Gelman.
Alexandre Dufour
11 May 2012 19:09
Hey nice stuff. Any chance to merge this with the current Thresholder plugin ?

Best Threshold

by Thomas Provoost

Choose the best auto thresholding technique for your data. Ported from Auto Threshold plugin in ImageJ by G. Landini (plus others, see documentation).

Publication Id
ICY-B5K3B1
See technical details
View complete changelog
Tags: threshold - otsu

Documentation

Original Plugin

This original plugin was developed for ImageJ as Auto Threshold, its author is Gabriel Landini.

Link to the plugin page: click here.

Methods

Huang

Reimplemented in ImageJ by Johannes Schindelin.

Otsu

C++ code by Jordan Bevik / Ported to ImageJ by G. Landini

Li

  • Li, CH & Lee, CK (1993), "Minimum Cross Entropy Thresholding", Pattern Recognition 26(4): 617-625
  • Li, CH & Tam, PKS (1998), "An Iterative Algorithm for Minimum Cross Entropy Thresholding", Pattern Recognition Letters 18(8): 771-776

Ported to ImageJ plugin by G.Landini

Percentile

Ported to ImageJ plugin by G.Landini

Shanbhag

Coming soon...

Triangle

Coming soon...

Yen

Coming soon...