Short Description
This protocol crops the input sequence to the bounding box of each ROI (thus producing a list of cropped sequences), and saves the list of crops onto disk.
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3-D3D3D coordinatesalignmentbasicsbatch processingCalciumcell trackingCLEMcolocalizationcomptageconfocalconnected componentscontributionconvolutioncorrelationdeconvolutiondeformable registrationdenoisingdetectiondetectordeveloperdisplacementsdistance mapexportezplugfeature detectionfeature matchingfilteringfluorescenceguiheadlesshelperHSV visualisationimage processImageJintensitymaskmavenmeasurementMHTmicroscopymonitoringmorphologymultiple hypothesis trackingnon rigid registrationoperatoroptimizationotsupluginpoint-spread functionprojectionprotocolPSFpythonregistrationreleaseRipley's K functionroiscriptscriptingsegmentationsequencesmoothingspatial distributionspotspot countstatisticssurfacesyntheticthresholdtoolboxtoolstrack processortrackingtutorialwarpingwavelet transformwaveletswidefieldworkbookXLS output
