Align multidimensional images in 2D or 3D, rigidly or with warping, whatever the difference in scale. Provide also a set [..]
Automatically segment the boundary of a nucleus or cell starting from an approximate ROI. It supports 2D and 3D processi [..]
3D Active Mesh plug-in for cell segmentation and tracking in 3D images and sequences.
This plug-in implements fast active surfaces for 3D image segmentation. Their representation in terms of spline surfaces [..]
Toolbox for light-sheet microscopy metrology.
Characterizes the PSF in 3D in the entire volume of a light-sheet image containing fluorescent beads.
TubeSkinner is a dimensionality reduction tool, that maps the fluorescence intensity over a 3D tubular structure onto a [..]
Takes the active 3D VTK viewer and records a 360-degree rotation of the data into a video sequence.
View 3D data in three orientations simultaneously (XY, YZ, XZ)
This plugin is used to manually isolate elements in 3D images, approximated by an ellipsoidal shape