plugins.big.blobgenerator
Class BlobGenerator

java.lang.Object
  icy.plugin.abstract_.Plugin
      icy.plugin.abstract_.PluginActionable
          plugins.adufour.ezplug.EzPlug
              plugins.big.blobgenerator.BlobGenerator

All Implemented Interfaces:

icy.plugin.interface_.PluginImageAnalysis, icy.plugin.interface_.PluginLibrary, java.lang.Runnable, plugins.adufour.blocks.lang.Block, plugins.adufour.ezplug.EzStoppable

public class BlobGenerator
extends plugins.adufour.ezplug.EzPlug
implements plugins.adufour.blocks.lang.Block, plugins.adufour.ezplug.EzStoppable

Main class of the Blob Generator plugin. This plugin generates random cells (ellipsoids) in a noisy background. The result consists in a 2D or 3D sequence images. The user can tune the noisy background by editing the noise density function and choosing the blending function.He can also choose the noise scale, i.e. the spatial frequency of the noise. Moreover, ROI corresponding to the cells are added to the sequence. This plugin works with Protocols as well.

Version:

May 3, 2014

Author:

Julien Jacquemot

Nested Class Summary

class

BlobGenerator.SendTracksToPoolThr

Nested classes/interfaces inherited from interface plugins.adufour.ezplug.EzStoppable

plugins.adufour.ezplug.EzStoppable.ForcedInterruptionHandler

Field Summary

Fields inherited from class plugins.adufour.ezplug.EzPlug

EZPLUG_MAINTAINERS

Constructor Summary

BlobGenerator()

Method Summary

void	clean()
void	declareInput(plugins.adufour.blocks.util.VarList inputMap)
void	declareOutput(plugins.adufour.blocks.util.VarList outputMap)
void	stopExecution()
void	valueChanged(plugins.adufour.vars.lang.Var<?> source) Method called when a noise property changed.

Methods inherited from class plugins.adufour.ezplug.EzPlug

compute, createUI, generateEzPlugCodeFragment, getName, getNbInstances, getStartTime, getUI, hideUI, isHeadLess, loadParameters, run, saveParameters, setTimeDisplay, showUI

Methods inherited from class icy.plugin.abstract_.Plugin

addIcyFrame, addSequence, getActiveImage, getActiveSequence, getActiveViewer, getDescriptor, getFocusedImage, getFocusedSequence, getFocusedViewer, getIconResource, getImageResource, getInstallFolder, getPlugin, getPreferences, getPreferencesRoot, getResource, getResourceAsStream, getResources, getSequences, loadLibrary, removeSequence, report

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface plugins.adufour.blocks.lang.Block

run

Constructor Detail

BlobGenerator

public BlobGenerator()

Method Detail

stopExecution

public void stopExecution()

Specified by:

stopExecution in interface plugins.adufour.ezplug.EzStoppable

clean

public void clean()

Specified by:

clean in class plugins.adufour.ezplug.EzPlug

declareInput

public void declareInput(plugins.adufour.blocks.util.VarList inputMap)

Specified by:

declareInput in interface plugins.adufour.blocks.lang.Block

declareOutput

public void declareOutput(plugins.adufour.blocks.util.VarList outputMap)

Specified by:

declareOutput in interface plugins.adufour.blocks.lang.Block

valueChanged

public void valueChanged(plugins.adufour.vars.lang.Var<?> source)

Method called when a noise property changed. Updates the noise preview sequence if visible.