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C

c - Variable in class plugins.big.bigsnakeutils.icy.ellipsoid.Ellipsoid3D
One of the axis of the ellipsoid.
Circle - Class in plugins.big.bigsnakeutils.shape.priorshapes.shapes
Shape prior with taking the shape of a circle.
Circle() - Constructor for class plugins.big.bigsnakeutils.shape.priorshapes.shapes.Circle
 
clear() - Method in class plugins.big.bigsnakeutils.icy.gui.curve.Curve
Remove all the control points except the first and the last ones.
clear() - Method in class plugins.big.bigsnakeutils.icy.gui.curve.PolynomialCurve
 
clone() - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.AbstractEllipsoid
Return another instance of this descriptor sharing the same properties.
clone() - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.Ellipsoid2D
 
clone() - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.Ellipsoid3D
 
clone() - Method in class plugins.big.bigsnakeutils.icy.gui.curve.Curve
 
clone() - Method in class plugins.big.bigsnakeutils.icy.gui.curve.PolynomialCurve
 
clone() - Method in class plugins.big.bigsnakeutils.icy.gui.pair.Pair
 
clone() - Method in class plugins.big.bigsnakeutils.icy.gui.pair.Pair.Double
 
clone() - Method in class plugins.big.bigsnakeutils.icy.gui.pair.Pair.Float
 
clone() - Method in class plugins.big.bigsnakeutils.icy.gui.pair.Pair.Integer
 
CollapsiblePanel - Class in plugins.big.bigsnakeutils.icy.gui
Panel that supports collapsing some elements.
CollapsiblePanel(String) - Constructor for class plugins.big.bigsnakeutils.icy.gui.CollapsiblePanel
 
compareTo(Snake3DNode) - Method in class plugins.big.bigsnakeutils.icy.snake3D.Snake3DNode
Comparator that organizes the points by their first component.
computeBounds2D() - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.EllipsoidROI2D
 
computeBounds3D() - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.EllipsoidROI3D
 
computeBSplineFilter(int) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
This function compute the B-Spline Filter B(z).
computeESplineDerivativeMask(int, double, int) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
This function compute the derivative mask of a ESpline3
computeMultinomialCoef(int[], int, int, double[]) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
This function compute the multinomial coefficient corresponding of the combination of the ki done by the function multinomial().
computePolynomialDerivative(double, int) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
This function compute the derivative mask of a B-Spline
computePolynomialDerivativeMask(int) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
This function compute the derivative mask of a B-Spline
ConstantBSpline(double) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
Causal constant B-spline.
contains(double, double) - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.Ellipsoid2D
Returns true if the given point is inside the ellipse.
contains(double, double, double[]) - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.Ellipsoid2D
Returns true if the give point is insid the ellipse.
contains(double, double, double) - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.Ellipsoid3D
Returns true if the given point is inside the ellipsoid.
contains(double, double, double, double[]) - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.Ellipsoid3D
Returns true if the give point is insid the ellipsoid.
contains(double, double) - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.EllipsoidROI2D
 
contains(double, double, double, double) - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.EllipsoidROI2D
 
contains(double, double, double) - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.EllipsoidROI3D
 
contains(double, double, double, double, double, double) - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.EllipsoidROI3D
 
contains(double, double, double, double, double) - Method in class plugins.big.bigsnakeutils.icy.ellipsoid.EllipsoidROI3D
 
containsInXYProjection(Point2D) - Method in class plugins.big.bigsnakeutils.icy.snake3D.Snake3DScale
 
ContourTracing - Class in plugins.big.bigsnakeutils.shape.utils
Class that encapsulates a contour tracing algorithm.
ContourTracing(boolean[], int, int) - Constructor for class plugins.big.bigsnakeutils.shape.utils.ContourTracing
 
convolutedGreenFunctionESpline(double, double, double, double, double) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
The Green function corresponding to the convolution of two exponential splines with parameters alpha1 and alpha2 which have been scaled M1 and M2 times respectively.
convolve(double[], double[], double[]) - Static method in class plugins.big.bigsnakeutils.process.process1D.Convolver1D
Convolves a sequence with a kernel, and puts the result in a new array.
convolveEvenX(double[][], double[]) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with a symmetric kernel along x.
convolveEvenX(double[], double[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with a symmetric kernel along x, for an image defined as a 1-D array.
convolveEvenX(float[], float[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with a symmetric kernel along x, for an image defined as a 1-D array.
convolveEvenX(double[], double[], int[], int, int, int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with a symmetric kernel along x, for an image defined as a 1-D array, in a region bounded by [x1..x2] and [y1..y2].
convolveEvenY(double[][], double[]) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with a symmetric kernel along y.
convolveEvenY(double[], double[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with a symmetric kernel along y, for an image defined as a 1-D array.
convolveEvenY(float[], float[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with a symmetric kernel along y, for an image defined as a 1-D array.
convolveEvenY(double[], double[], int[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with a symmetric kernel along x, for an image defined as a 1-D array, in a region bounded by [x1..x2] and [y1..y2].
convolveOddX(double[][], double[]) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with an anti-symmetric kernel along x.
convolveOddX(double[], double[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with an anti-symmetric kernel along x, for an image defined as a 1-D array.
convolveOddX(float[], float[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with an anti-symmetric kernel along x, for an image defined as a 1-D array.
convolveOddX(double[], double[], int[], int, int, int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with an anti-symmetric kernel along x, for an image defined as a 1-D array, in a region bounded by [x1..x2] and [y1..y2].
convolveOddY(double[][], double[]) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with an anti-symmetric kernel along y.
convolveOddY(double[], double[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with an anti-symmetric kernel along y, for an image defined as a 1-D array.
convolveOddY(float[], float[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with an anti-symmetric kernel along y, for an image defined as a 1-D array.
convolveOddY(double[], double[], int[], int, int) - Static method in class plugins.big.bigsnakeutils.process.process2D.Convolver2D
Convolution with an anti-symmetric kernel along y, for an image defined as a 1-D array, in a region bounded by [x1..x2] and [y1..y2].
Convolver1D - Class in plugins.big.bigsnakeutils.process.process1D
Class that encloses a one-dimensional convolver.
Convolver1D() - Constructor for class plugins.big.bigsnakeutils.process.process1D.Convolver1D
 
Convolver2D - Class in plugins.big.bigsnakeutils.process.process2D
Fast 2-D convolution routines for symmetric kernels.
Convolver2D() - Constructor for class plugins.big.bigsnakeutils.process.process2D.Convolver2D
 
CorpusCallosum - Class in plugins.big.bigsnakeutils.shape.priorshapes.shapes
Shape prior with taking the shape of a cross section of the corpus callosum within the brain.
CorpusCallosum() - Constructor for class plugins.big.bigsnakeutils.shape.priorshapes.shapes.CorpusCallosum
 
correlationESpline(int, double) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
Sampled correlation of the exponential B-spline of order three with a filter.
correlationMSplineMSplinePrime(int, int) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
Sampled correlation of the MSpline with MSplinePrime, i.e.
correlationOfTwoESpline(double, double, double, double, double) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
Correlation function of two exponential B-splines of order three with parameters alpha1 and alpha2 which have been scaled M1 and M2 times respectively.
cot(double) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
Cotangent.
count() - Method in class plugins.big.bigsnakeutils.icy.gui.curve.Curve
Returns the number of control points.
createVarEditor() - Method in class plugins.big.bigsnakeutils.icy.gui.curve.VarCurve
 
createVarEditor() - Method in class plugins.big.bigsnakeutils.icy.gui.pair.VarPair
 
Cross - Class in plugins.big.bigsnakeutils.shape.priorshapes.shapes
Shape prior with taking the shape of a cross.
Cross() - Constructor for class plugins.big.bigsnakeutils.shape.priorshapes.shapes.Cross
 
csc(double) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
Cosecant.
CubicBSpline(double) - Static method in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
Causal cubic B-spline.
CUBICBSPLINESUPPORT - Static variable in class plugins.big.bigsnakeutils.process.process1D.BSplineBasis
Length of the support of the cubic B-spline.
Curve - Class in plugins.big.bigsnakeutils.icy.gui.curve
Abstract class describing a curve.
Curve() - Constructor for class plugins.big.bigsnakeutils.icy.gui.curve.Curve
 
CurveCanvas - Class in plugins.big.bigsnakeutils.icy.gui.curve
Class displaying a curve in a frame.
CurveCanvas() - Constructor for class plugins.big.bigsnakeutils.icy.gui.curve.CurveCanvas
Default constructor.
CurveCanvas(Curve) - Constructor for class plugins.big.bigsnakeutils.icy.gui.curve.CurveCanvas
Default constructor.
CurveEditor - Class in plugins.big.bigsnakeutils.icy.gui.curve
VarEditor for Curve objects.
CurveEditor(VarCurve) - Constructor for class plugins.big.bigsnakeutils.icy.gui.curve.CurveEditor
Default constructor.
CurveModel - Class in plugins.big.bigsnakeutils.icy.gui.curve
VarEditorModel for Curve objects.
CurveModel(Curve) - Constructor for class plugins.big.bigsnakeutils.icy.gui.curve.CurveModel
Default constructor.
Custom - Class in plugins.big.bigsnakeutils.shape.priorshapes.shapes
Shape prior with taking the shape of a banana.
Custom(Snake2DNode[]) - Constructor for class plugins.big.bigsnakeutils.shape.priorshapes.shapes.Custom
 
Custom3D - Class in plugins.big.bigsnakeutils.shape.priorshapes.shapes
Custom 3D shape
Custom3D(Snake3DNode[]) - Constructor for class plugins.big.bigsnakeutils.shape.priorshapes.shapes.Custom3D
 

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