A B C D E G H I K L M O P R S T U V

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getAboutBanner() - Method in class plugins.big.bigsnake3d.rsc.ResourceUtil
Returns an image with the banner of the plug-in.
getActiveSnakeKeeper() - Method in class plugins.big.bigsnake3d.keeper.KeepersList
Returns the active SnakeKeeper.
getAlpha() - Method in class plugins.big.bigsnake3d.gui.SnakeSettingsPane
Returns the energy tradeoff parameter introduced by the user.
getAlpha() - Method in class plugins.big.bigsnake3d.snake.SphereSnakeParameters
 
getAppName() - Method in class plugins.big.bigsnake3d.core.Settings
Returns the name of the plug-in.
getAppVersion() - Method in class plugins.big.bigsnake3d.core.Settings
Returns the version of the plug-in.
getArea() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Retrieves the area of the surface of the snake.
getBinaryMask() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Returns a Sequence object containing a binary image representing the voxels enclosed by the snake surface.
getBounds() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Returns the bounding box aligned with the axis containing the snake surface.
getCentroid() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Returns a point with the position of the center of gravity of the scales.
getChannelNumber() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns the active channel.
getControlPoint(int) - Method in class plugins.big.bigsnake3d.roi.ROI3DSnake
 
getDepthTransparency() - Method in class plugins.big.bigsnake3d.core.DisplaySettings
 
getDetectType() - Method in class plugins.big.bigsnake3d.snake.SphereSnakeParameters
 
getDisplaySettings() - Method in class plugins.big.bigsnake3d.gui.DisplaySettingsPane
 
getEnergyGradient() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
The purpose of this method is to compute the gradient of the snake energy with respect to the snake-defining nodes.
getEnergyType() - Method in class plugins.big.bigsnake3d.gui.SnakeSettingsPane
Returns the energy type selected by the user.
getEnergyType() - Method in class plugins.big.bigsnake3d.snake.SphereSnakeParameters
 
getESnakeParameters() - Method in class plugins.big.bigsnake3d.keeper.SnakeKeeper
 
getFilteredImageDataArray() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns a two dimensional array containing the pixel values of the image after applying a smoothed Laplacian filter of the active channel.
getGamma() - Method in class plugins.big.bigsnake3d.gui.SnakeSettingsPane
Returns the weight of the stiffness of the surface.
getGamma() - Method in class plugins.big.bigsnake3d.snake.SphereSnakeParameters
 
getIcon(SnakeIcons) - Method in class plugins.big.bigsnake3d.rsc.ResourceUtil
Returns an image the icon of the plug-in.
getIcyRequiredVersion() - Method in class plugins.big.bigsnake3d.core.Settings
Returns the minimum version of ICY in which the plug-in works properly.
getID() - Method in class plugins.big.bigsnake3d.keeper.SnakeKeeper
 
getImageDataArray() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns a two dimensional array containing the pixel values of the original image of the active channel.
getImageDepth() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns the depth in pixels of the image.
getImageHeight() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns the height in pixels of the image.
getImageWidth() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns the with in pixels of the image.
getInstance() - Static method in class plugins.big.bigsnake3d.core.Settings
Get Settings instance
getInstance() - Static method in class plugins.big.bigsnake3d.rsc.ResourceUtil
Get Settings instance
getM() - Method in class plugins.big.bigsnake3d.snake.SphereSnakeParameters
 
getMaxIterations() - Method in class plugins.big.bigsnake3d.gui.SnakeSettingsPane
Returns the maximum number of iterations introduced by the user.
getMaxLife() - Method in class plugins.big.bigsnake3d.snake.SphereSnakeParameters
 
getMeshResolution() - Method in class plugins.big.bigsnake3d.core.DisplaySettings
 
getNodes() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
This method provides an accessor to the snake-defining nodes.
getNodesCopy() - Method in class plugins.big.bigsnake3d.keeper.SnakeKeeper
 
getNumControlPoints() - Method in class plugins.big.bigsnake3d.gui.SnakeSettingsPane
Returns the number of control points introduced by the user.
getNumKeepers() - Method in class plugins.big.bigsnake3d.keeper.KeepersList
Returns the number of SnakeKeeper in the internal list.
getNumNodes() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Returns the number of points that define the snake.
getNumScales() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Returns the number of scales provided by the method getScales().
getOriginalSequence() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns the image from where the image data is extracted.
getPreintegratedFilteredImageDataArray() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns a one dimensional array containing the pixel values of the image after applying a smoohted Laplacian filter after preintegration of the active channel.
getPreintegratedImageDataArray() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns a one dimensional array containing the pixel values of the original image after preintegration of the active channel.
getQuadMesh() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Returns a quad mesh representing the snake surface.
getScale(int) - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Computes the i-th scale.
getScales() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
The purpose of this method is to determine what to draw on screen, given the current configuration of nodes.
getSigma() - Method in class plugins.big.bigsnake3d.core.ImageLUTContainer
Returns the standard deviation of the Gaussian kernel used for smoothing.
getSnakeNodes() - Method in class plugins.big.bigsnake3d.core.Snake3DClipboard
 
getSnakeParameters() - Method in class plugins.big.bigsnake3d.core.Snake3DClipboard
 
getSnakeParameters() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Returns a new container with the information of the execution parameters of the snake.
getStrokeThickness() - Method in class plugins.big.bigsnake3d.core.DisplaySettings
 
getSurfaceArea() - Method in class plugins.big.bigsnake3d.roi.ROI3DSnake
Retrieves the area of the surface of the snake.
getTargetBrightness() - Method in class plugins.big.bigsnake3d.gui.SnakeSettingsPane
Returns the brightness detection mode selected by the user.
getToolTipMessage(int) - Static method in class plugins.big.bigsnake3d.gui.ToolTipsMessages
Returns a particular tip in the list.
getToolTipMessage() - Static method in class plugins.big.bigsnake3d.gui.ToolTipsMessages
Returns a random tip in the list.
getToolTipMessages() - Static method in class plugins.big.bigsnake3d.gui.ToolTipsMessages
Returns the list of tips.
getVolume() - Method in class plugins.big.bigsnake3d.roi.ROI3DSnake
Retrieves the volume inside the surface determined by the snake.
getVolume() - Method in class plugins.big.bigsnake3d.snake.SphereSnake
Retrieves the volume inside the surface determined by the snake.
getZ() - Method in class plugins.big.bigsnake3d.roi.Anchor3D
 

A B C D E G H I K L M O P R S T U V