A B C D E G I K L M O P R S T U V

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getAboutBanner() - Method in class plugins.big.bigsnake.rsc.ResourceUtil
Returns an image with the banner of the plug-in.
getActiveSnakeKeeper() - Method in class plugins.big.bigsnake.keeper.KeepersList
Returns the active SnakeKeeper.
getAlpha() - Method in class plugins.big.bigsnake.gui.SnakeSettingsPane
Returns the energy tradeoff parameter introduced by the user.
getAlpha() - Method in class plugins.big.bigsnake.snake.ESnakeParameters
 
getAppName() - Method in class plugins.big.bigsnake.core.Settings
Returns the name of the plug-in.
getAppVersion() - Method in class plugins.big.bigsnake.core.Settings
Returns the version of the plug-in.
getArea() - Method in class plugins.big.bigsnake.snake.ESnake
Retrieves the area under the curve determined by the snake.
getAsBooleanMask(int, int, int, int, boolean) - Method in class plugins.big.bigsnake.roi.ROI2DSnake
Get the ROI as a boolean bitmap mask for the specified rectangular area.
getBeta() - Method in class plugins.big.bigsnake.gui.SnakeSettingsPane
Returns the energy weight associated to the prior-shape energy.
getBeta() - Method in class plugins.big.bigsnake.snake.ESnakeParameters
 
getBounds() - Method in class plugins.big.bigsnake.snake.ESnake
Returns the bounding box of the snake curve.
getCentroid() - Method in class plugins.big.bigsnake.snake.ESnake
Returns a point with the position of the center of gravity of the scales.
getCentroidRefinement() - Method in class plugins.big.bigsnake.snake.ESnake
 
getChannelNumber() - Method in class plugins.big.bigsnake.core.ImageLUTContainer
Returns the active channel.
getColor() - Method in class plugins.big.bigsnake.roi.ROI2DSnake
Gets the color of the first polyline forming the skin of the snake.
getControlPoint(int) - Method in class plugins.big.bigsnake.roi.ROI2DSnake
 
getCopy() - Method in class plugins.big.bigsnake.roi.ROI2DSnake
Method that creates a copy of the contour of the snake as an ROI2DPath.
getCustomPriorShape() - Method in class plugins.big.bigsnake.core.Snake2DClipboard
Returns the custom prior shape element.
getCustomPriorShape() - Method in class plugins.big.bigsnake.gui.SnakeSettingsPane
 
getCustomPriorShape() - Method in class plugins.big.bigsnake.keeper.SnakeKeeper
 
getCustomPriorShape() - Method in class plugins.big.bigsnake.snake.ESnake
Returns the custom shape prior (if any).
getDetectType() - Method in class plugins.big.bigsnake.snake.ESnakeParameters
 
getEnergyGradient() - Method in class plugins.big.bigsnake.snake.ESnake
The purpose of this method is to compute the gradient of the snake energy with respect to the snake-defining nodes.
getEnergyType() - Method in class plugins.big.bigsnake.gui.SnakeSettingsPane
Returns the energy type selected by the user.
getEnergyType() - Method in class plugins.big.bigsnake.snake.ESnakeParameters
 
getESnakeParameters() - Method in class plugins.big.bigsnake.keeper.SnakeKeeper
 
getFilteredImageDataArray() - Method in class plugins.big.bigsnake.core.ImageLUTContainer
Returns a one dimensional array containing the pixel values of the image after applying a smoothed Laplacian filter of the active channel.
getFilterSize() - Method in class plugins.big.bigsnake.snake.ESnake
 
getIcon(SnakeIcons) - Method in class plugins.big.bigsnake.rsc.ResourceUtil
Returns an image the icon of the plug-in.
getIcyRequiredVersion() - Method in class plugins.big.bigsnake.core.Settings
Returns the minimum version of Icy in which the plug-in works properly.
getID() - Method in class plugins.big.bigsnake.keeper.SnakeKeeper
Returns the unique identifier of this SnakeKeeper.
getImageDataArray() - Method in class plugins.big.bigsnake.core.ImageLUTContainer
Returns a one dimensional array containing the pixel values of the original image of the active channel.
getImageHeight() - Method in class plugins.big.bigsnake.core.ImageLUTContainer
Returns the height in pixels of the image.
getImageWidth() - Method in class plugins.big.bigsnake.core.ImageLUTContainer
Returns the with in pixels of the image.
getIndexRefinement() - Method in class plugins.big.bigsnake.snake.ESnake
 
getInstance() - Static method in class plugins.big.bigsnake.core.Settings
Get Settings instance
getInstance() - Static method in class plugins.big.bigsnake.rsc.ResourceUtil
Get Settings instance
getIOXMLUtils() - Method in class plugins.big.bigsnake.BIGSnake
Returns the IOXMLUtils object that the plugin uses to save and load xml files.
getM() - Method in class plugins.big.bigsnake.snake.ESnakeParameters
 
getMaxIterations() - Method in class plugins.big.bigsnake.gui.SnakeSettingsPane
Returns the maximum number of iterations introduced by the user.
getMaxLife() - Method in class plugins.big.bigsnake.snake.ESnakeParameters
 
getNodes() - Method in class plugins.big.bigsnake.snake.ESnake
This method provides an accessor to the snake-defining nodes.
getNodesCopy() - Method in class plugins.big.bigsnake.keeper.SnakeKeeper
Returns a copy of the snake-defining nodes of this SnakeKeeper.
getNumControlPoints() - Method in class plugins.big.bigsnake.gui.SnakeSettingsPane
Returns the number of control points introduced by the user.
getNumKeepers() - Method in class plugins.big.bigsnake.keeper.KeepersList
Returns the number of SnakeKeeper in the internal list.
getNumNodes() - Method in class plugins.big.bigsnake.snake.ESnake
This method returns the quantity of snake-defining nodes.
getNumScales() - Method in class plugins.big.bigsnake.snake.ESnake
Returns the number of scales provided by the method getScales().
getOrientation() - Method in class plugins.big.bigsnake.snake.ESnake
Retrieves the orientation of the curve determined by the snake.
getOriginalSequence() - Method in class plugins.big.bigsnake.core.ImageLUTContainer
Returns the image from where the image data is extracted.
getPreintegratedFilteredImageDataArray() - Method in class plugins.big.bigsnake.core.ImageLUTContainer
Returns a one dimensional array containing the pixel values of the image after applying a smoothed Laplacian filter after preintegration of the active channel.
getPreintegratedImageDataArray() - Method in class plugins.big.bigsnake.core.ImageLUTContainer
Returns a one dimensional array containing the pixel values of the original image after preintegration of the active channel.
getPriorShapeType() - Method in class plugins.big.bigsnake.gui.SnakeSettingsPane
Returns the energy type selected by the user.
getPriorShapeType() - Method in class plugins.big.bigsnake.snake.ESnakeParameters
 
getRefinementFactor() - Method in class plugins.big.bigsnake.snake.ESnake
 
getScales() - Method in class plugins.big.bigsnake.snake.ESnake
The purpose of this method is to determine what to draw on screen, given the current configuration of nodes.
getSequence() - Method in class plugins.big.bigsnake.keeper.SnakeKeeper
Returns the Sequence object to which the keeper is attached to.
getShapeSpaceType() - Method in class plugins.big.bigsnake.gui.SnakeSettingsPane
Returns the shape space type selected by the user.
getShapeSpaceType() - Method in class plugins.big.bigsnake.snake.ESnakeParameters
 
getSigma() - Method in class plugins.big.bigsnake.core.ImageLUTContainer
Returns the standard deviation of the Gaussian kernel used for smoothing.
getSizeRefinementCoef() - Method in class plugins.big.bigsnake.snake.ESnake
 
getSnakeNodes() - Method in class plugins.big.bigsnake.core.Snake2DClipboard
Returns the spline control points of the snake.
getSnakeParameters() - Method in class plugins.big.bigsnake.core.Snake2DClipboard
Gets the execution parameters of the E-Snake.
getSnakeParameters() - Method in class plugins.big.bigsnake.snake.ESnake
Returns a new container with the information of the execution parameters of the snake.
getSubdivisionPoints() - Method in class plugins.big.bigsnake.snake.ESnake
 
getTargetBrightness() - Method in class plugins.big.bigsnake.gui.SnakeSettingsPane
Returns the brightness detection mode selected by the user.
getToolTipMessage(int) - Static method in class plugins.big.bigsnake.gui.ToolTipsMessages
Returns a particular tip in the list.
getToolTipMessage() - Static method in class plugins.big.bigsnake.gui.ToolTipsMessages
Returns a random tip in the list.
getToolTipMessages() - Static method in class plugins.big.bigsnake.gui.ToolTipsMessages
Returns the list of tips.

A B C D E G I K L M O P R S T U V