Uses of Class
icy.plugin.abstract_.Plugin

Packages that use Plugin

Package	Description
icy.gui.inspector	Contains all classes and components related to the Icy inspector
icy.gui.main	Contains graphic components and objects for the main interface
icy.main	Contains the main Icy class, responsible of the Icy application launch process (also contains the Icy version information)
icy.plugin	Contains Plugin class model and attached interfaces.
icy.plugin.abstract_	Plugin abstract classes
icy.preferences	Contains all Preference definition classes
icy.system.audit	Contains Audit tools (usage statistics for application and plugin)
plugins.kernel.canvas	Contains all canvas type plugins for the kernel
plugins.kernel.importer	Contains all Importer type plugins for the kernel
plugins.kernel.roi.descriptor.intensity	Contains ROI Descriptor plugins for intensity informations (kernel)
plugins.kernel.roi.descriptor.measure	Contains ROI Descriptor plugins for basic size measurements (kernel)
plugins.kernel.roi.descriptor.property	Contains ROI Descriptor plugins for ROI properties (kernel)
plugins.kernel.roi.roi2d.plugin	Contains all 2D ROI plugin classes included in the kernel
plugins.kernel.roi.roi3d.plugin
plugins.kernel.roi.tool.plugin
plugins.kernel.searchprovider	Contains all Search Provider plugins included in the kernel.
plugins.tutorial
plugins.tutorial.basics
plugins.tutorial.chart
plugins.tutorial.event
plugins.tutorial.gui
plugins.tutorial.painter
plugins.tutorial.roi
plugins.tutorial.training
plugins.tutorial.undo
plugins.tutorial.vtk

Uses of Plugin in icy.gui.inspector

Methods in icy.gui.inspector with parameters of type Plugin

Modifier and Type	Method and Description
void	PluginsPanel.pluginEnded(Plugin plugin)
void	PluginsPanel.pluginStarted(Plugin plugin)

Uses of Plugin in icy.gui.main

Methods in icy.gui.main that return types with arguments of type Plugin

Modifier and Type	Method and Description
java.util.ArrayList<Plugin>	MainInterfaceGui.getActivePlugins()
java.util.ArrayList<Plugin>	MainInterfaceBatch.getActivePlugins()
java.util.ArrayList<Plugin>	MainInterface.getActivePlugins() Returns the currently active plugins

Methods in icy.gui.main with parameters of type Plugin

Modifier and Type	Method and Description
void	GlobalPluginListener.pluginEnded(Plugin plugin) When this event occurs the plugin already exited and is now finalizing (garbage collection).
void	GlobalPluginListener.pluginStarted(Plugin plugin) The plugin was created and is about to start execution.
void	MainInterfaceGui.registerPlugin(Plugin plugin)
void	MainInterfaceBatch.registerPlugin(Plugin plugin)
void	MainInterface.registerPlugin(Plugin plugin)
void	MainInterfaceGui.unRegisterPlugin(Plugin plugin)
void	MainInterfaceBatch.unRegisterPlugin(Plugin plugin)
void	MainInterface.unRegisterPlugin(Plugin plugin)

Uses of Plugin in icy.main

Methods in icy.main that return Plugin

Modifier and Type	Method and Description
static Plugin	Icy.getStartupPlugin() Returns the startup plugin if any

Uses of Plugin in icy.plugin

Methods in icy.plugin that return Plugin

Modifier and Type	Method and Description
static Plugin	PluginLauncher.create(PluginDescriptor plugin) Creates a new instance of the specified plugin and returns it.
static Plugin	PluginLauncher.create(PluginDescriptor plugin, boolean register) Creates a new instance of the specified plugin and returns it.
static Plugin	PluginLauncher.start(PluginDescriptor plugin) Starts the specified plugin (catched exception version).
static Plugin	PluginLauncher.start(java.lang.String pluginClassName) Deprecated. Use PluginLauncher.start(PluginDescriptor) instead. You can retrieve a PluginDescriptor from the class name by using PluginLoader.getPlugin(String) method.
static Plugin	PluginLauncher.startSafe(PluginDescriptor plugin) Same as PluginLauncher.start(PluginDescriptor) except it throws Exception on error so user can handle them.
static Plugin	PluginLauncher.startSafe(java.lang.String pluginClassName) Deprecated. Use PluginLauncher.startSafe(PluginDescriptor) instead. You can retrieve a PluginDescriptor from the class name by using PluginLoader.getPlugin(String) method.

Methods in icy.plugin that return types with arguments of type Plugin

Modifier and Type	Method and Description
java.lang.Class<? extends Plugin>	PluginDescriptor.getPluginClass()
static java.lang.Class<? extends Plugin>	PluginLoader.getPluginClass(java.lang.String className) Returns the plugin class corresponding to the specified plugin class name.

Constructor parameters in icy.plugin with type arguments of type Plugin

Constructor and Description
PluginDescriptor(java.lang.Class<? extends Plugin> clazz) Create from class, used for local plugin.

Uses of Plugin in icy.plugin.abstract_

Subclasses of Plugin in icy.plugin.abstract_

Modifier and Type	Class and Description
class	PluginActionable Base class for actionable Plugin.
class	PluginFileImporter Plugin specialized for File import operation (see the FileImporter interface)
class	PluginImporter Plugin specialized for import operation (see the Importer interface)
class	PluginSequenceExporter Plugin specialized for Sequence export operation (see the SequenceExporter interface)
class	PluginSequenceFileExporter Plugin specialized for Sequence file export operation (see the SequenceFileExporter interface)
class	PluginSequenceFileImporter Plugin specialized for Sequence file import operation (see the SequenceFileImporter interface)
class	PluginSequenceIdImporter Plugin specialized for Sequence id import operation (see the SequenceIdImporter interface)
class	PluginSequenceImporter Plugin specialized for Sequence import operation (see the SequenceImporter interface)

Methods in icy.plugin.abstract_ that return Plugin

Modifier and Type	Method and Description
static Plugin	Plugin.getPlugin(java.util.List<Plugin> list, java.lang.String className)

Method parameters in icy.plugin.abstract_ with type arguments of type Plugin

Modifier and Type	Method and Description
static Plugin	Plugin.getPlugin(java.util.List<Plugin> list, java.lang.String className)

Uses of Plugin in icy.preferences

Methods in icy.preferences with parameters of type Plugin

Modifier and Type	Method and Description
static XMLPreferences	IcyPreferences.pluginRoot(Plugin plugin) Deprecated. Use PluginsPreferences.root(Plugin) instead.
static XMLPreferences	PluginsPreferences.root(Plugin plugin) Return root node for specified Plugin

Method parameters in icy.preferences with type arguments of type Plugin

Modifier and Type	Method and Description
static XMLPreferences	PluginsPreferences.root(java.lang.Class<? extends Plugin> pluginClass) Return root node for specified Plugin class.

Uses of Plugin in icy.system.audit

Methods in icy.system.audit with parameters of type Plugin

Modifier and Type	Method and Description
void	AuditStorage.pluginInstanced(Plugin plugin)
static void	Audit.pluginInstanced(Plugin plugin) Plugin instanced event audit
void	AuditStorage.pluginLaunched(Plugin plugin)
static void	Audit.pluginLaunched(Plugin plugin) Plugin launched event audit

Uses of Plugin in plugins.kernel.canvas

Subclasses of Plugin in plugins.kernel.canvas

Modifier and Type	Class and Description
class	Canvas2DPlugin
class	VtkCanvasPlugin Plugin wrapper for VtkCanvas

Uses of Plugin in plugins.kernel.importer

Subclasses of Plugin in plugins.kernel.importer

Modifier and Type	Class and Description
class	LociImporterPlugin LOCI Bio-Formats library importer class.

Uses of Plugin in plugins.kernel.roi.descriptor.intensity

Subclasses of Plugin in plugins.kernel.roi.descriptor.intensity

Modifier and Type	Class and Description
class	ROIIntensityDescriptorsPlugin This PluginROIDescriptor implements the following "intensity" ROI descriptors: Minimum intensity Mean intensity Maximum intensity Sum intensity Standard deviation

Uses of Plugin in plugins.kernel.roi.descriptor.measure

Subclasses of Plugin in plugins.kernel.roi.descriptor.measure

Modifier and Type	Class and Description
class	ROIBasicMeasureDescriptorsPlugin This PluginROIDescriptor implements the following basic measures ROI descriptors: Contour (in pixel) Interior (in pixel) Perimeter (pixel size unit - 2D ROI only) Surface Area (pixel size unit - 3D ROI only) Area (pixel size unit - 2D ROI only) Volume (pixel size unit - 3D ROI only)
class	ROIMassCenterDescriptorsPlugin This PluginROIDescriptor implements the mass center ROI descriptors: Mass center X (in pixel) Mass center Y (in pixel) Mass center C (in pixel) Mass center Z (in pixel) Mass center T (in pixel)

Uses of Plugin in plugins.kernel.roi.descriptor.property

Subclasses of Plugin in plugins.kernel.roi.descriptor.property

Modifier and Type	Class and Description
class	ROIPositionDescriptorsPlugin This PluginROIDescriptor implements the position ROI descriptors: Position X (in pixel) Position Y (in pixel) Position C (in pixel) Position Z (in pixel) Position T (in pixel)
class	ROIPropertyDescriptorsPlugin This PluginROIDescriptor implements the properties ROI descriptors: Name Color Opacity Read only
class	ROISizeDescriptorsPlugin This PluginROIDescriptor implements the size ROI descriptors: Size X (in pixel) Size Y (in pixel) Size C (in pixel) Size Z (in pixel) Size T (in pixel)

Uses of Plugin in plugins.kernel.roi.roi2d.plugin

Subclasses of Plugin in plugins.kernel.roi.roi2d.plugin

Modifier and Type	Class and Description
class	ROI2DAreaPlugin Plugin class for ROI2DArea.
class	ROI2DEllipsePlugin Plugin class for ROI2DEllipse.
class	ROI2DLinePlugin Plugin class for ROI2DLine.
class	ROI2DPointPlugin Plugin class for ROI2DPoint.
class	ROI2DPolygonPlugin Plugin class for ROI2DPolygon.
class	ROI2DPolyLinePlugin Plugin class for ROI2DPolyLine.
class	ROI2DRectanglePlugin Plugin class for ROI2DRectangle.

Uses of Plugin in plugins.kernel.roi.roi3d.plugin

Subclasses of Plugin in plugins.kernel.roi.roi3d.plugin

Modifier and Type	Class and Description
class	ROI3DLinePlugin Plugin class for ROI3DLine.
class	ROI3DPointPlugin Plugin class for ROI3DPoint.
class	ROI3DPolyLinePlugin Plugin class for ROI3DPolyLine.

Uses of Plugin in plugins.kernel.roi.tool.plugin

Subclasses of Plugin in plugins.kernel.roi.tool.plugin

Modifier and Type	Class and Description
class	ROILineCutterPlugin Plugin class for ROI2DLine.

Uses of Plugin in plugins.kernel.searchprovider

Subclasses of Plugin in plugins.kernel.searchprovider

Modifier and Type	Class and Description
class	PluginKernelSearchProvider
class	PluginLocalPluginProvider
class	PluginOnlinePluginProvider

Uses of Plugin in plugins.tutorial

Subclasses of Plugin in plugins.tutorial

Modifier and Type	Class and Description
class	StartAPluginFromAPlugin This tutorial shows how to start a plugin from a plugin.

Uses of Plugin in plugins.tutorial.basics

Subclasses of Plugin in plugins.tutorial.basics

Modifier and Type	Class and Description
class	GenerateABugTutorial This tutorial just create a bug to watch the bug report window in action To make it harder to catch by ICY, we add the PluginStartAsThread interface, which starts the plugin as a thread.
class	GenerateImageOfDifferentType This plugin generates image of all types supported by ICY.
class	HelloWorldPlugin This tutorial displays a simple message at the bottom of the screen, in a scrolling annonceFrame.
class	ListOfRegisteredPlugins This tutorial displays the registered plugins ( installed and recognized plugins in ICY ).
class	SimpleIntensify This plugin do a simple intensify operation on current opened image
class	TransparentlyProcessAnyImageDataType This tutorial details how to create a simple image processing section without specific knowledge of the original data type.

Uses of Plugin in plugins.tutorial.chart

Subclasses of Plugin in plugins.tutorial.chart

Modifier and Type	Class and Description
class	ChartTutorial1 A simple demonstration application showing how to create a bar chart, adapted to ICY.
class	ChartTutorial2 A simple demonstration of a more complex graph from JFreeChart, adapted to ICY

Uses of Plugin in plugins.tutorial.event

Subclasses of Plugin in plugins.tutorial.event

Modifier and Type	Class and Description
class	ActiveSequenceListenerTutorial
class	MainListenerTutorial This class demonstrate how use the MainListener to track global event on Viewer, Sequence, ROI and Painter objects

Uses of Plugin in plugins.tutorial.gui

Subclasses of Plugin in plugins.tutorial.gui

Modifier and Type	Class and Description
class	GuiBuildExample01 Plugin Example: A simple interface with some features.
class	SequenceActionFrameExample This example demonstrates a simple use of the SequenceActionFrame object

Uses of Plugin in plugins.tutorial.painter

Subclasses of Plugin in plugins.tutorial.painter

Modifier and Type	Class and Description
class	AnimatedOverlayTutorial This tutorial displays a fancy marked animation at each click.
class	SimpleOverlayTutorial1 This example displays a simple cross over the sequence.
class	SimpleOverlayTutorial2 This plugin shows interaction of painters with users.

Uses of Plugin in plugins.tutorial.roi

Subclasses of Plugin in plugins.tutorial.roi

Modifier and Type	Class and Description
class	CreateAreaROI This tutorial creates an Area ROI containing pixel of values greater than the mean of the band 0 of the image (t=0, z=0).
class	IntensityOverRoi This tutorial details how to create an intensity ruler.
class	ProcessingFromROI This class show how we can use ROI to do localized operation on image

Uses of Plugin in plugins.tutorial.training

Subclasses of Plugin in plugins.tutorial.training

Modifier and Type	Class and Description
class	MaximumZProjectionPlugin Basic image processing plugin example: apply a maximum intensity projection along Z axis on the active sequence
class	MeanIntensityPlugin1
class	MeanIntensityPlugin2
class	MeanIntensityPlugin3
class	ModifyImagePlugin1
class	ModifyImagePlugin2
class	ModifyImagePlugin3
class	OverlayPlugin1
class	ThresholdPlugin1
class	ThresholdPlugin2

Uses of Plugin in plugins.tutorial.undo

Subclasses of Plugin in plugins.tutorial.undo

Modifier and Type	Class and Description
class	AdvancedUndo This plugin demonstrate how to use the Undo framework with 'redo' operation support.
class	SimpleUndo This plugin demonstrate how to use the Undo framework in a very lazy / simple way

Uses of Plugin in plugins.tutorial.vtk

Subclasses of Plugin in plugins.tutorial.vtk

Modifier and Type	Class and Description
class	VtkPainterExamples This plugin shows how to render different VTK objects type through the Painter.