Package | Description |
---|---|
icy.gui.component |
Contains all custom components related classes (component, UI, renderer, editor...)
|
icy.plugin.interface_ |
All supported plugin interface to specialize plugin in a specific task (Canvas, ROI, file importer...)
|
icy.roi |
Contains all ROI (Region Of Interest) related classes and tools
|
plugins.kernel.roi.descriptor.intensity |
Contains ROI Descriptor plugins for intensity informations (kernel)
|
plugins.kernel.roi.descriptor.measure |
Contains ROI Descriptor plugins for basic size measurements (kernel)
|
plugins.kernel.roi.descriptor.property |
Contains ROI Descriptor plugins for ROI properties (kernel)
|
Modifier and Type | Field and Description |
---|---|
ROIDescriptor |
AbstractRoisPanel.BaseColumnInfo.descriptor |
Constructor and Description |
---|
AbstractRoisPanel.BaseColumnInfo(ROIDescriptor descriptor,
XMLPreferences preferences,
boolean export) |
Modifier and Type | Method and Description |
---|---|
java.util.Map<ROIDescriptor,java.lang.Object> |
PluginROIDescriptor.compute(ROI roi,
Sequence sequence)
Computes the descriptor(s) (declared in the
PluginROIDescriptor.getDescriptors() ) on the specified ROI. |
java.util.List<ROIDescriptor> |
PluginROIDescriptor.getDescriptors()
Returns the list of
ROIDescriptor available in this plug-in. |
Modifier and Type | Method and Description |
---|---|
static ROIDescriptor |
ROIDescriptor.getDescriptor(java.util.Collection<ROIDescriptor> descriptors,
java.lang.String id)
Returns the descriptor identified by the given id from the given list of
ROIDescriptor . |
static ROIDescriptor |
ROIDescriptor.getDescriptor(java.lang.String id)
Returns the descriptor identified by the given id from the given list of
ROIDescriptor . |
Modifier and Type | Method and Description |
---|---|
static java.util.Map<ROIDescriptor,PluginROIDescriptor> |
ROIDescriptor.getDescriptors()
Returns all available ROI descriptors (see
ROIDescriptor ) and their attached plugin
(see PluginROIDescriptor ). |
static java.util.Map<ROIDescriptor,PluginROIDescriptor> |
ROIUtil.getROIDescriptors()
Returns all available ROI descriptors (see
ROIDescriptor ) and their attached plugin
(see PluginROIDescriptor ). |
Modifier and Type | Method and Description |
---|---|
static java.lang.Object |
ROIUtil.computeDescriptor(java.util.Collection<ROIDescriptor> roiDescriptors,
java.lang.String descriptorId,
ROI roi,
Sequence sequence)
Computes the specified descriptor from the input
ROIDescriptor set on given ROI
and returns the result (or null if the descriptor is not found). |
static java.lang.Object |
ROIDescriptor.computeDescriptor(java.util.Collection<ROIDescriptor> roiDescriptors,
java.lang.String descriptorId,
ROI roi,
Sequence sequence)
Computes the specified descriptor from the input
ROIDescriptor set on given ROI
and returns the result (or null if the descriptor is not found). |
static java.lang.Object |
ROIUtil.computeDescriptor(java.util.Set<ROIDescriptor> roiDescriptors,
java.lang.String descriptorId,
ROI roi,
Sequence sequence)
Deprecated.
|
static ROIDescriptor |
ROIDescriptor.getDescriptor(java.util.Collection<ROIDescriptor> descriptors,
java.lang.String id)
Returns the descriptor identified by the given id from the given list of
ROIDescriptor . |
Modifier and Type | Class and Description |
---|---|
class |
ROIMaxIntensityDescriptor
Maximum intensity ROI descriptor class (see
ROIDescriptor ) |
class |
ROIMeanIntensityDescriptor
Mean intensity ROI descriptor class (see
ROIDescriptor ) |
class |
ROIMinIntensityDescriptor
Minimum intensity ROI descriptor class (see
ROIDescriptor ) |
class |
ROIStandardDeviationDescriptor
Standard Deviation intensity ROI descriptor class (see
ROIDescriptor ) |
class |
ROISumIntensityDescriptor
Sum intensity ROI descriptor class (see
ROIDescriptor ) |
Modifier and Type | Method and Description |
---|---|
java.util.Map<ROIDescriptor,java.lang.Object> |
ROIIntensityDescriptorsPlugin.compute(ROI roi,
Sequence sequence) |
java.util.List<ROIDescriptor> |
ROIIntensityDescriptorsPlugin.getDescriptors() |
Modifier and Type | Class and Description |
---|---|
class |
ROIAreaDescriptor
Area ROI descriptor class (see
ROIDescriptor ) |
class |
ROIContourDescriptor
Contour ROI descriptor class (see
ROIDescriptor ) |
class |
ROIInteriorDescriptor
Interior ROI descriptor class (see
ROIDescriptor ) |
class |
ROIMassCenterCDescriptor
MassCenter C coordinate ROI descriptor class (see
ROIDescriptor ) |
class |
ROIMassCenterTDescriptor
MassCenter T coordinate ROI descriptor class (see
ROIDescriptor ) |
class |
ROIMassCenterXDescriptor
MassCenter X coordinate ROI descriptor class (see
ROIDescriptor ) |
class |
ROIMassCenterYDescriptor
MassCenter Y coordinate ROI descriptor class (see
ROIDescriptor ) |
class |
ROIMassCenterZDescriptor
MassCenter Z coordinate ROI descriptor class (see
ROIDescriptor ) |
class |
ROIPerimeterDescriptor
Perimeter ROI descriptor class (see
ROIDescriptor ) |
class |
ROISurfaceAreaDescriptor
Surface area ROI descriptor class (see
ROIDescriptor ) |
class |
ROIVolumeDescriptor
Volume ROI descriptor class (see
ROIDescriptor ) |
Modifier and Type | Method and Description |
---|---|
java.util.Map<ROIDescriptor,java.lang.Object> |
ROIMassCenterDescriptorsPlugin.compute(ROI roi,
Sequence sequence) |
java.util.Map<ROIDescriptor,java.lang.Object> |
ROIBasicMeasureDescriptorsPlugin.compute(ROI roi,
Sequence sequence) |
java.util.List<ROIDescriptor> |
ROIMassCenterDescriptorsPlugin.getDescriptors() |
java.util.List<ROIDescriptor> |
ROIBasicMeasureDescriptorsPlugin.getDescriptors() |
Modifier and Type | Class and Description |
---|---|
class |
ROIColorDescriptor |
class |
ROIGroupIdDescriptor
Group Id descriptor class (see
ROIDescriptor ) |
class |
ROIIconDescriptor
Icon descriptor class (see
ROIDescriptor ). |
class |
ROINameDescriptor
Name descriptor class (see
ROIDescriptor ) |
class |
ROIOpacityDescriptor
Opacity descriptor class (see
ROIDescriptor ) |
class |
ROIPositionCDescriptor
Position C ROI descriptor class (see
ROIDescriptor ) |
class |
ROIPositionTDescriptor
Position T ROI descriptor class (see
ROIDescriptor ) |
class |
ROIPositionXDescriptor
Position X ROI descriptor class (see
ROIDescriptor ) |
class |
ROIPositionYDescriptor
Position Y ROI descriptor class (see
ROIDescriptor ) |
class |
ROIPositionZDescriptor
Position Z ROI descriptor class (see
ROIDescriptor ) |
class |
ROIReadOnlyDescriptor
Read-Only descriptor class (see
ROIDescriptor ) |
class |
ROISizeCDescriptor
Size C ROI descriptor class (see
ROIDescriptor ) |
class |
ROISizeTDescriptor
Size T ROI descriptor class (see
ROIDescriptor ) |
class |
ROISizeXDescriptor
Size X ROI descriptor class (see
ROIDescriptor ) |
class |
ROISizeYDescriptor
Size Y ROI descriptor class (see
ROIDescriptor ) |
class |
ROISizeZDescriptor
Size Z ROI descriptor class (see
ROIDescriptor ) |
Modifier and Type | Method and Description |
---|---|
java.util.Map<ROIDescriptor,java.lang.Object> |
ROISizeDescriptorsPlugin.compute(ROI roi,
Sequence sequence) |
java.util.Map<ROIDescriptor,java.lang.Object> |
ROIPropertyDescriptorsPlugin.compute(ROI roi,
Sequence sequence) |
java.util.Map<ROIDescriptor,java.lang.Object> |
ROIPositionDescriptorsPlugin.compute(ROI roi,
Sequence sequence) |
java.util.List<ROIDescriptor> |
ROISizeDescriptorsPlugin.getDescriptors() |
java.util.List<ROIDescriptor> |
ROIPropertyDescriptorsPlugin.getDescriptors() |
java.util.List<ROIDescriptor> |
ROIPositionDescriptorsPlugin.getDescriptors() |