Package | Description |
---|---|
icy.file |
Contains all file operation tools and related objects
|
icy.gui.dialog |
Contains all custom Dialog (modal frame)
|
icy.image |
Contains all Image related stuff as the Icy image data structure, ColorModel, ColorSpace, ColorMap, Image tools...
|
icy.plugin.abstract_ |
Plugin abstract classes
|
plugins.kernel.importer |
Contains all Importer type plugins for the kernel
|
Modifier and Type | Interface and Description |
---|---|
interface |
SequenceFileImporter
Sequence file importer interface.
|
Modifier and Type | Class and Description |
---|---|
class |
SequenceFileGroupImporter
Special importer able to group a list of path (
SequenceFileSticher.SequenceFileGroup ) to build a single Sequence out of it. |
Modifier and Type | Method and Description |
---|---|
static java.util.List<SequenceIdImporter> |
Loader.getSequenceIdImporters()
Returns all available sequence importer which take path as input.
|
Modifier and Type | Method and Description |
---|---|
static Sequence |
Loader.internalLoadSingle(SequenceIdImporter importer,
ome.xml.meta.OMEXMLMetadata metadata,
int series,
int resolution,
java.awt.Rectangle region,
int minZ,
int maxZ,
int minT,
int maxT,
int channel,
boolean forceVolatile,
FileFrame loadingFrame)
Internal use only !
|
static int[] |
Loader.selectSeries(SequenceIdImporter importer,
java.lang.String path,
ome.xml.meta.OMEXMLMetadata meta,
int defaultSerie,
boolean singleSelection)
Display the Series Selection frame for the given image and returns selected series(s).
|
static void |
Loader.setupSequence(Sequence sequence,
SequenceIdImporter importer,
boolean multiSerie,
int series,
java.awt.Rectangle region,
int resolution,
int sizeZ,
int sizeT,
int sizeC,
int minZ,
int maxZ,
int minT,
int maxT,
int channel)
Setup the specified sequence object given the different opening informations
|
Constructor and Description |
---|
SeriesSelectionDialog(SequenceIdImporter importer,
java.lang.String id,
ome.xml.meta.OMEXMLMetadata metadata,
boolean singleSelection) |
Modifier and Type | Field and Description |
---|---|
SequenceIdImporter |
IcyBufferedImage.ImageSourceInfo.imp |
Modifier and Type | Method and Description |
---|---|
void |
IcyBufferedImage.setImageSourceInfo(SequenceIdImporter imp,
int series,
int resolution,
java.awt.Rectangle region,
int t,
int z,
int c)
Set the image source information that will be used later for lazy image data loading.
|
Constructor and Description |
---|
IcyBufferedImage.ImageSourceInfo(SequenceIdImporter imp,
int series,
int resolution,
java.awt.Rectangle region,
int t,
int z,
int c) |
Modifier and Type | Class and Description |
---|---|
class |
PluginSequenceFileImporter
Plugin specialized for Sequence file import operation (see the
SequenceFileImporter interface) |
class |
PluginSequenceIdImporter
Plugin specialized for Sequence id import operation (see the
SequenceIdImporter interface) |
Modifier and Type | Class and Description |
---|---|
class |
LociImporterPlugin
LOCI Bio-Formats library importer class.
|