Uses of Class
icy.type.DataType

Packages that use DataType

Package	Description
icy.action	Contains all Icy action command classes which are accessible through the search bar
icy.file	Contains all file operation tools and related objects
icy.gui.menu	Contains graphic components and objects related to the main (Ribbon) menu
icy.image	Contains all Image related stuff as the Icy image data structure, ColorModel, ColorSpace, ColorMap, Image tools...
icy.image.colormodel	Contains the base Icy ColorModel structure definition and the different supported ColorModel
icy.roi	Contains all ROI (Region Of Interest) related classes and tools
icy.sequence	Contains Icy Sequence structure definition and associated objects / tools.
icy.type	Contains custom data type definition and tools for generic and multi dimensional array manipulation
icy.type.collection.array	Contains array type definition and tools (generic arrays, dynamic arrays...)
icy.util	Contains common utilities classes (String, XLS, XML, ZIP, JAR, OME, Graphics, Date, Shape, Class...)
icy.vtk	Contains VTK library related stuff (wrapper, tools)

Uses of DataType in icy.action

Methods in icy.action with parameters of type DataType

Modifier and Type	Method and Description
static IcyAbstractAction	SequenceOperationActions.getConvertSequenceAction(DataType dataType, boolean scaled)

Uses of DataType in icy.file

Fields in icy.file declared as DataType

Modifier and Type	Field and Description
DataType	SequenceFileSticher.SequenceType.dataType

Methods in icy.file with parameters of type DataType

Modifier and Type	Method and Description
static void	Loader.checkOpening(int resolution, int sizeX, int sizeY, int sizeC, int sizeZ, int sizeT, DataType dataType, java.lang.String messageSuffix) Check if we have enough resource to open the image defined by the given size information and wanted resolution.
static loci.formats.ome.OMEXMLMetadata	Saver.generateMetaData(int sizeX, int sizeY, int sizeC, DataType dataType) Deprecated. use OMEUtil.generateMetaData(int, int, int, DataType, boolean) instead
static loci.formats.ome.OMEXMLMetadata	Saver.generateMetaData(int sizeX, int sizeY, int sizeC, int sizeZ, int sizeT, DataType dataType) Deprecated. use OMEUtil.generateMetaData(int, int, int, int, int, DataType, boolean) instead
static IcyColorModel	Saver.getCompatibleColorModel(loci.formats.IFormatWriter writer, int numChannel, DataType dataType) Return the closest compatible IcyColorModel supported by writer from the specified image description.
static IcyColorModel	Saver.getCompatibleColorModel(ImageFileFormat imageFileFormat, int numChannel, DataType dataType) Return the closest compatible IcyColorModel supported by the specified ImageFileFormat from the specified image description.
static boolean	Saver.isCompatible(loci.formats.IFormatWriter writer, int numChannel, boolean alpha, DataType dataType) Return true if the specified writer is compatible with the image description.
static boolean	Saver.isCompatible(ImageFileFormat imageFileFormat, int numChannel, boolean alpha, DataType dataType) Return true if the specified image file format is compatible with the image description.
static void	Saver.saveImage(byte[] data, int width, int height, int numChannel, DataType dataType, java.io.File file, boolean force) Save a single image from bytes buffer to the specified file.

Uses of DataType in icy.gui.menu

Methods in icy.gui.menu with parameters of type DataType

Modifier and Type	Method and Description
static IcyCommandToggleMenuButton	SequenceOperationTask.CopyConvertBand.getConvertButton(Sequence sequence, DataType dataType, boolean scaled, org.pushingpixels.flamingo.api.common.CommandToggleButtonGroup group)

Uses of DataType in icy.image

Methods in icy.image that return DataType

Modifier and Type	Method and Description
DataType	IcyBufferedImage.getDataType_() Return the data type of this image

Methods in icy.image with parameters of type DataType

Modifier and Type	Method and Description
IcyBufferedImage	IcyBufferedImage.convertToType(DataType dataType, boolean rescale) Deprecated. Uses IcyBufferedImageUtil.convertToType(IcyBufferedImage, DataType, boolean) instead.
IcyBufferedImage	IcyBufferedImage.convertToType(DataType dataType, Scaler scaler) Deprecated. Uses IcyBufferedImageUtil.convertType(IcyBufferedImage, DataType, Scaler[]) instead.
static IcyBufferedImage	IcyBufferedImageUtil.convertToType(IcyBufferedImage source, DataType dataType, boolean rescale) Convert the source image to the specified data type.
static IcyBufferedImage	IcyBufferedImageUtil.convertToType(IcyBufferedImage source, DataType dataType, boolean rescale, boolean useDataBounds) Convert the source image to the specified data type.
static IcyBufferedImage	IcyBufferedImageUtil.convertToType(IcyBufferedImage source, DataType dataType, Scaler scaler) Deprecated. Use IcyBufferedImageUtil.convertType(IcyBufferedImage, DataType, Scaler[]) instead.
static IcyBufferedImage	IcyBufferedImageUtil.convertType(IcyBufferedImage source, DataType dataType, Scaler[] scalers) Convert the source image to the specified data type.

Constructors in icy.image with parameters of type DataType

Constructor and Description
IcyBufferedImage(int width, int height, int numComponents, DataType dataType) Create an ICY formatted BufferedImage with specified width, height, number of component and dataType.
IcyBufferedImage(int width, int height, int numComponents, DataType dataType, boolean forceVolatileData) Create an ICY formatted BufferedImage with specified width, height, number of component and dataType.

Uses of DataType in icy.image.colormodel

Methods in icy.image.colormodel that return DataType

Modifier and Type	Method and Description
DataType	IcyColorModel.getDataType_() Return data type for this colormodel

Methods in icy.image.colormodel with parameters of type DataType

Modifier and Type	Method and Description
static IcyColorModel	IcyColorModel.createInstance(int numComponents, DataType dataType) Creates a new ColorModel with the given color component and image data type

Uses of DataType in icy.roi

Methods in icy.roi with parameters of type DataType

Modifier and Type	Method and Description
static Sequence	ROIUtil.convertToSequence(java.util.List<ROI> inputRois, int sizeX, int sizeY, int sizeC, int sizeZ, int sizeT, DataType dataType, boolean label) Convert a list of ROI into a binary / labeled Sequence.

Uses of DataType in icy.sequence

Methods in icy.sequence that return DataType

Modifier and Type	Method and Description
DataType	Sequence.getDataType_() Returns the data type of sequence
DataType	SequenceBuilder.getDataType() Data-type of the sequence to be created
static DataType	MetaDataUtil.getDataType(loci.formats.ome.OMEXMLMetadataImpl metaData, int series) Deprecated. Use MetaDataUtil.getDataType(OMEXMLMetadata, int) instead
static DataType	MetaDataUtil.getDataType(ome.xml.meta.OMEXMLMetadata metaData, int series) Returns the data type of the specified image series.

Methods in icy.sequence with parameters of type DataType

Modifier and Type	Method and Description
Sequence	Sequence.convertToType(DataType dataType, boolean rescale) Deprecated. Use SequenceUtil.convertToType(Sequence, DataType, boolean) instead.
Sequence	Sequence.convertToType(DataType dataType, Scaler scaler) Deprecated. Use SequenceUtil.convertType(Sequence, DataType, Scaler[]) instead.
static Sequence	SequenceUtil.convertToType(Sequence source, DataType dataType, boolean rescale) Converts the source sequence to the specified data type.
static Sequence	SequenceUtil.convertToType(Sequence source, DataType dataType, boolean rescale, boolean useDataBounds) Converts the source sequence to the specified data type.
static Sequence	SequenceUtil.convertToType(Sequence source, DataType dataType, Scaler scaler) Deprecated. Use SequenceUtil.convertType(Sequence, DataType, Scaler[]) instead.
static Sequence	SequenceUtil.convertType(Sequence source, DataType dataType, Scaler[] scalers) Converts the source sequence to the specified data type.
static ome.xml.meta.OMEXMLMetadata	MetaDataUtil.generateMetaData(int sizeX, int sizeY, int sizeC, DataType dataType, boolean separateChannel) Generates Meta Data for the given arguments.
static ome.xml.meta.OMEXMLMetadata	MetaDataUtil.generateMetaData(int sizeX, int sizeY, int sizeC, int sizeZ, int sizeT, DataType dataType, boolean separateChannel) Generates meta data for the given image properties.
static void	MetaDataUtil.setDataType(loci.formats.ome.OMEXMLMetadataImpl metaData, int series, DataType dataType) Deprecated. Use MetaDataUtil.setDataType(OMEXMLMetadata, int, DataType) instead
static void	MetaDataUtil.setDataType(ome.xml.meta.OMEXMLMetadata metaData, int series, DataType dataType) Sets the data type of the specified image series.
static void	MetaDataUtil.setMetaData(loci.formats.ome.OMEXMLMetadataImpl metadata, int sizeX, int sizeY, int sizeC, int sizeZ, int sizeT, DataType dataType, boolean separateChannel) Deprecated. Use MetaDataUtil.setMetaData(OMEXMLMetadata, int, int, int, int, int, DataType, boolean) instead
static void	MetaDataUtil.setMetaData(ome.xml.meta.OMEXMLMetadata metadata, int sizeX, int sizeY, int sizeC, int sizeZ, int sizeT, DataType dataType, boolean separateChannel) Set metadata object with the given image properties.

Constructors in icy.sequence with parameters of type DataType

Constructor and Description
SequenceBuilder(int sizeX, int sizeY, int sizeZ, int sizeT, int sizeC, DataType dataType) Allocate a new sequence that will have the given size, dataType and an empty name
SequenceBuilder(int sizeX, int sizeY, int sizeZ, int sizeT, int sizeC, DataType dataType, Sequence target) If non-null, the 'target' argument will be used to store the result of the sequence building process, and no new sequence will be created.

Uses of DataType in icy.type

Methods in icy.type that return DataType

Modifier and Type	Method and Description
static DataType	DataType.getDataType(java.lang.Class<?> classType) Return a DataType from the specified primitive class type
static DataType	DataType.getDataType(int oldDataType) Return a DataType from old dataType.
static DataType	DataType.getDataType(int oldDataType, boolean signed) Return a DataType from old dataType.
static DataType	DataType.getDataType(java.lang.String value) Return a DataType from the specified string.
static DataType	DataType.getDataTypeFromDataBufferType(int dataBufferType) Return a DataType from the specified DataBuffer type.
static DataType	DataType.getDataTypeFromFormatToolsType(int type) Return a DataType from the specified FormatTools type.
static DataType	DataType.getDataTypeFromPixelType(ome.xml.model.enums.PixelType type) Return a DataType from the specified PixelType.
static DataType	DataType.getDataTypeFromVTKType(int vtkType) Return a DataType from the specified VTK type.
DataType	DataType.getJavaType() Return the java compatible data type (signed integer type only).
static DataType	DataType.valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static DataType[]	DataType.values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods in icy.type with parameters of type DataType

Modifier and Type	Method and Description
boolean	DataType.isSameJavaType(DataType dataType) Return true if specified data type has same "basic" type (no sign information) data type

Uses of DataType in icy.type.collection.array

Methods in icy.type.collection.array that return DataType

Modifier and Type	Method and Description
DataType	ArrayType.getDataType() Return the data type for this array
static DataType	ArrayUtil.getDataType(java.lang.Object array) Return the DataType (java type only) of the specified array.
static DataType	ArrayUtil.getDataType(java.lang.Object array, boolean signed) Return the DataType of the specified array

Methods in icy.type.collection.array with parameters of type DataType

Modifier and Type	Method and Description
static java.lang.Object	Array1DUtil.allocIfNull(java.lang.Object out, DataType dataType, int len) Allocate the specified 1D array if it's defined to null with the specified len
static java.lang.Object	ByteArrayConvert.byteArrayTo(byte[] in, DataType outDataType, boolean little) Bit transform and return the 'in' byte array in the specified data type array
static java.lang.Object	ByteArrayConvert.byteArrayTo(byte[] in, int inOffset, DataType outDataType, int length, boolean little) Bit transform and return the 'in' byte array in the specified data type array
static java.lang.Object	ByteArrayConvert.byteArrayTo(byte[] in, int inOffset, DataType outDataType, int outOffset, int length, boolean little) Bit transform and return the 'in' byte array in the specified data type array
static DynamicArray	DynamicArray.create(DataType type) Create a DynamicArray with specified type
static DynamicArray	DynamicArray.create(DataType type, int granularity) Create a DynamicArray with specified type.
static java.lang.Object[][]	Array3DUtil.createArray(DataType dataType, int len) Create a new 3D array with specified data type and length
static java.lang.Object[]	Array2DUtil.createArray(DataType dataType, int len) Create a new 2D array with specified data type and length
static java.lang.Object	Array1DUtil.createArray(DataType dataType, int len) Create a new 1D array with specified data type and length
static java.lang.Object	ArrayUtil.createArray(DataType dataType, int dim, int len) Allocate the specified array data type with specified number of dimension.
static double	Array1DUtil.getValue(java.lang.Object array, int offset, DataType dataType) Get value as double from specified 1D array and offset.
static float	Array1DUtil.getValueAsFloat(java.lang.Object array, int offset, DataType dataType) Get value as float from specified 1D array and offset.
static int	Array1DUtil.getValueAsInt(java.lang.Object array, int offset, DataType dataType) Get value as integer from specified 1D array and offset.
static long	Array1DUtil.getValueAsLong(java.lang.Object array, int offset, DataType dataType) Get value as integer from specified 1D array and offset.
void	ArrayType.setDataType(DataType dataType)
static void	Array1DUtil.setValue(java.lang.Object array, int offset, DataType dataType, double value) Set value at specified offset as double value.
static java.lang.Object	Array1DUtil.stringToArray(java.lang.String value, DataType dataType) Return the specified string containing separated values as a 1D array By default separator is assumed to be ':' character ex : "0:1:2:3:4" --> [0,1,2,3,4]
static java.lang.Object	Array1DUtil.stringToArray(java.lang.String value, DataType dataType, boolean hexa, java.lang.String separator) Return the specified string containing separated values as a 1D array ex : "0:1:2:3:4" --> [0,1,2,3,4]
static java.lang.Object	ArrayUtil.stringToArray1D(java.lang.String value, DataType dataType) Return the specified string containing separated values as a 1D array By default separator is assumed to be ':' character ex : "0:1:2:3:4" --> [0,1,2,3,4]
static java.lang.Object	ArrayUtil.stringToArray1D(java.lang.String value, DataType dataType, boolean hexa, java.lang.String separator) Return the specified string containing separated values as a 1D array ex : "0:1:2:3:4" --> [0,1,2,3,4]

Constructors in icy.type.collection.array with parameters of type DataType

Constructor and Description
ArrayDataType(DataType dataType, int dim) Deprecated.
ArrayType(DataType dataType, int dim)

Uses of DataType in icy.util

Methods in icy.util with parameters of type DataType

Modifier and Type	Method and Description
static ome.xml.meta.OMEXMLMetadata	OMEUtil.generateMetaData(int sizeX, int sizeY, int sizeC, DataType dataType, boolean separateChannel) Deprecated. Use MetaDataUtil.generateMetaData(int, int, int, DataType, boolean) instead.
static ome.xml.meta.OMEXMLMetadata	OMEUtil.generateMetaData(int sizeX, int sizeY, int sizeC, int sizeZ, int sizeT, DataType dataType, boolean separateChannel) Deprecated. Uses MetaDataUtil.generateMetaData(int, int, int, int, int, DataType, boolean) instead.
static loci.formats.ome.OMEXMLMetadataImpl	OMEUtil.generateMetaData(loci.formats.ome.OMEXMLMetadataImpl metadata, int sizeX, int sizeY, int sizeC, int sizeZ, int sizeT, DataType dataType, boolean separateChannel) Deprecated. Uses MetaDataUtil.setMetaData(OMEXMLMetadata, int, int, int, int, int, DataType, boolean) instead.

Uses of DataType in icy.vtk

Methods in icy.vtk with parameters of type DataType

Modifier and Type	Method and Description
static vtk.vtkImageData	VtkUtil.getImageData(java.lang.Object data, DataType dataType, int sizeX, int sizeY, int sizeZ, int sizeC) Creates and returns a vtkImageData object from the specified 1D array data.
static int	VtkUtil.getVtkType(DataType type) Returns the VTK type corresponding to the specified DataType