icy.imagej

Class ImageJUtil

java.lang.Object

icy.imagej.ImageJUtil

public class ImageJUtil
extends java.lang.Object

ImageJ utilities class.

Author:

Stephane

Constructor Summary

Constructors

Constructor and Description
ImageJUtil()

Method Summary

Methods

Modifier and Type	Method and Description
static IcyBufferedImage	convertToIcyBufferedImage(ij.ImagePlus image, int z, int t) Convert the ImageJ ImagePlus image at position [Z,T] into an Icy image
static IcyBufferedImage	convertToIcyBufferedImage(ij.ImagePlus image, int z, int t, int sizeX, int sizeY, int sizeC, int type, boolean signed16) Convert the ImageJ ImagePlus image at position [Z,T] into an Icy image
static java.util.List<ROI2D>	convertToIcyRoi(ij.gui.Roi roi) Convert the specified ImageJ Roi object to Icy ROI.
static Sequence	convertToIcySequence(ij.ImagePlus image, ProgressListener progressListener) Convert the specified ImageJ ImagePlus object to Icy Sequence
static ij.ImagePlus	convertToImageJImage(Sequence sequence, boolean useRoiManager, ProgressListener progressListener) Convert the specified Icy Sequence object to ImageJ ImagePlus
static ij.ImagePlus	convertToImageJImage(Sequence sequence, ProgressListener progressListener) Convert the specified Icy Sequence object to ImageJ ImagePlus
static ij.gui.Roi	convertToImageJRoi(ROI2D roi) Convert the specified Icy ROI object to ImageJ Roi.
static ij.gui.PointRoi	convertToImageJRoiPoint(java.util.List<ROI2DPoint> points) Deprecated. Use convertToImageJRoi(ROI2D) instead.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ImageJUtil

public ImageJUtil()

Method Detail

convertToIcyBufferedImage

public static IcyBufferedImage convertToIcyBufferedImage(ij.ImagePlus image,
                                         int z,
                                         int t,
                                         int sizeX,
                                         int sizeY,
                                         int sizeC,
                                         int type,
                                         boolean signed16)

Convert the ImageJ ImagePlus image at position [Z,T] into an Icy image

convertToIcyBufferedImage

public static IcyBufferedImage convertToIcyBufferedImage(ij.ImagePlus image,
                                         int z,
                                         int t)

Convert the ImageJ ImagePlus image at position [Z,T] into an Icy image

convertToIcySequence

public static Sequence convertToIcySequence(ij.ImagePlus image,
                            ProgressListener progressListener)

Convert the specified ImageJ ImagePlus object to Icy Sequence

convertToImageJImage

public static ij.ImagePlus convertToImageJImage(Sequence sequence,
                                boolean useRoiManager,
                                ProgressListener progressListener)

Convert the specified Icy Sequence object to ImageJ ImagePlus

convertToImageJImage

public static ij.ImagePlus convertToImageJImage(Sequence sequence,
                                ProgressListener progressListener)

Convert the specified Icy Sequence object to ImageJ ImagePlus

convertToIcyRoi

public static java.util.List<ROI2D> convertToIcyRoi(ij.gui.Roi roi)

Convert the specified ImageJ Roi object to Icy ROI.

convertToImageJRoi

public static ij.gui.Roi convertToImageJRoi(ROI2D roi)

Convert the specified Icy ROI object to ImageJ Roi.

convertToImageJRoiPoint

@Deprecated
public static ij.gui.PointRoi convertToImageJRoiPoint(java.util.List<ROI2DPoint> points)

Deprecated. Use convertToImageJRoi(ROI2D) instead.