Short Description

Cytomine Client

This plugins are compatible with Cytomine version 1 servers , NOT version 2 servers.

Available plugins:

  • Project Explorer
  • Image Viewer

Available protocol blocks:

  • Create Cytomine client
  • Get Cytomine annotation
  • Get Cytomine image
  • Get Cytomine project
  • Remove Cytomine annotation
  • Send ROIs to Cytomine

Available batch blocks:

  • Cytomine annotation loop
  • Cytomine annotation tiler
  • Cytomine image loop
  • Cytomine project loop

More information on Gitlab page

Team: Bio Image Analysis Unit
Institution: Institut Pasteur
Website: https://research.pasteur.fr/en/team/bioimage-analysis/
Gitlab repo: https://gitlab.pasteur.fr/bia/icytomine

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Changelog

  • Version 1.0.5.0 • Released on: 2022-09-23 00:00:00
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    Description:

    Optimized user annotation geometry fetch (linking geometry with user annotation)

  • Version 1.0.4.0 • Released on: 2022-09-22 18:00:00
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    Description:

    Fixed internal dependencies (may need more work)

  • Version 1.0.3.0 • Released on: 2022-09-22 12:00:00
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    Description:

    - switched to develop branch (and merged in master to avoid futures mistakes), re-introducing recent changes.
    - cleaned up pom file, dependencies

  • Version 1.0.2.0 • Released on: 2022-08-24 15:00:00
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    Description:

    Reverted to java client version 2.2.20 (2.3.0 has issue retrieving with pixel size information)

  • Version 1.0.1.0 • Released on: 2022-02-15 17:00:00
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    Description:

    Updated to last version, fixed missing dependencies.

  • Version 1.0.0.0 • Released on: 2021-02-10 09:32:24
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    Description:

    Unified client and batch plugins. Batch should be uninstalled for this plugin to work.
    Mavenized project and fix exception when opening the plugin

  • Version 0.0.1.0 • Released on: 2019-04-16 17:17:27
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