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in Category: detection [7]
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Convert frame – time to channel example
Cells detection and tracking with Active Contour
var total_items = 7;

Leaf area counter

protocol
Giordano Basili Luciani

this protocols allow to calculate internal leaf area. first of all, the destination excel file need to be create in order to save results, than the la [..]

Detection (with cluster un-mixing) and tracking of neurons with EMC2

protocol
Thibault Lagache

This protocol 1- detects bright spots (neurons) with Wavelet spot detector 2- un-mix (i.e. detects individual spots in large clusters) with Laplacian [..]

Batch spots detections and statistics

protocol
Marion Louveaux

Batch spots detections and statistics

Spots detection and colocalisation analysis with SODA

protocol
Marion Louveaux

Spots detection and colocalisation analysis with SODA

Detection and Tracking of neurons with EMC2

protocol
Thibault Lagache

This protocol is designed to track neurons in calcium imaging of behaving animal. It contains a step of spot detection (wavelet Spot detector), follow [..]

Rainbow Spot detector scale finder

protocol
IcyLyd

This protocol helps you to find the right scale sensitivity  when using the spot detector plugin, to get the most adapted segmentation.   [..]

Substructure Analyzer

protocol
Isabelle Behm-Ansmant

The Substructure Analyzer workflow allows automatic analysis of fluorescent signals in cellular compartments and measurement of different features s [..]

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