Short Description Usable on global view of a 96-Well Plates. It creates a grid of oval ROIs on the sequence and computes the mean intensity. Versions Version 1 • Released on: 2013-03-13 16:16:39 Download Description: initial version importClass(Packages.icy.roi.ROIUtil) importClass(Packages.icy.roi.ROI2D) importClass(Packages.icy.sequence.Sequence) importClass(Packages.icy.roi.ROI2DEllipse) importClass(Packages.java.awt.geom.Point2D) seq = getSequence() size = 34 space = 56 xa = 191 - 34 / 2 ya = 180 - 34 / 2 xb = 191 + 34 / 2 yb = 180 + 34 / 2 for (i = 0; i < 12; i = i + 1) { for (j = 0; j < 8; j = j + 1) { xai = xa + space * i yai = ya + space * j xbi = xb + space * i ybi = yb + space * j topLeft = new Point2D.Double(xai, yai) bottomRight = new Point2D.Double(xbi, ybi) roi = new ROI2DEllipse(topLeft, bottomRight) intensity = ROIUtil.getMeanIntensity(seq, roi) println("" + (j + 1) + "t" + (i + 1) + "t" + intensity) } }