Write xml setting to the TIF file & OrthoSlice functionality?

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    chenw11 July 5, 2019 at 6:49 pm

    ICY offer a great Alpha (transparency) Colormap adjustment tool. I tried get a orthoslice display from my sample, but it seems like ICY could not do it yet. So I want to save the colormap setting to the TIF file, then use ImageJ to get a orthoslice view. Could anyone help me in terms of writing xml setting to a tif file or are there anyway I can view orthoslice directly in ICY. Thanks!

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    • This topic was modified 4 years, 9 months ago by
      chenw11      .
    • This topic was modified 4 years, 9 months ago by
      chenw11      .
    Stephane Dallongeville July 8, 2019 at 5:11 pm

    Dear Chen,

     

    There is an orthoview in Icy :

    But maybe that is not what you want ? There is no way to slice in the 3D volume viewer is that was what you wanted unfortunately.

    Best,

    – Stephane

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