Icy Version 1.5.4.2
Java(TM) SE Runtime Environment 1.7.0_71-b14 (64 bit)
Running on Mac OS X 10.9.5 (x86_64)
Max java memory : 5461.5 MB
Plugin Track Manager 1.4.0.5
Dependances:
Plugin Track Processor Color 1.1.0.2 installed
Plugin Track Processor Flow 1.0.0.7 installed
Plugin Track Processor Instant Speed 1.0.0.8 installed
Plugin Track Processor ROI Gate 1.0.0.4 installed
Plugin Track Processor Time Clip 1.0.0.5 installed
Plugin Track Processor MSD 1.0.0.2 installed
Plugin Track Processor export track to Excel 0.0.1.0 installed
Plugin Spot detection utilities 1.1.0.6 installed
Plugin Motion Profiler 3.0.3.0 installed
Plugin Track Processor Intensity Profile 0.0.1.8 installed
Email: yann.cesbron@univ-rennes1.fr
Comment:
I cannot seem to import tracks from Particle Tracker (ISBI importer) without an error message appearing (and the tracks not being imported).
I guess it is either related to the number of trajectories (18296) or to the sequence length (6000 images).
If I try with a small sequence (72 images) with small total number of trajectories (99) from a tutorial it works though.
java.lang.NegativeArraySizeException
at java.awt.image.DataBufferInt.
at java.awt.image.Raster.createPackedRaster(Raster.java:467)
at java.awt.image.DirectColorModel.createCompatibleWritableRaster(DirectColorModel.java:1032)
at java.awt.image.BufferedImage.
at plugins.fab.trackmanager.TrackPanel.redrawDetection3(TrackPanel.java:782)
at plugins.fab.trackmanager.TrackPanel$1.run(TrackPanel.java:709)
at icy.system.thread.ThreadUtil.invokeNow(ThreadUtil.java:207)
at plugins.fab.trackmanager.TrackPanel.clearDetectionsAndReDisplay(TrackPanel.java:701)
at plugins.fab.trackmanager.TrackPanel.TrackEditorProcessorChange(TrackPanel.java:1256)
at plugins.fab.trackmanager.TrackPool.fireTrackEditorProcessorChange(TrackPool.java:428)
at plugins.fab.trackmanager.TrackManager$CheckBoxResultSource.
at plugins.fab.trackmanager.TrackManager.swimmingPoolChangeEvent(TrackManager.java:452)
at icy.swimmingPool.SwimmingPool.fireSwimmingPoolEvent(SwimmingPool.java:399)
at icy.swimmingPool.SwimmingPool.add(SwimmingPool.java:48)
at plugins.nchenouard.trackprocessorchallengetracksimporter.TrackProcessorChallengeTracksImporter$TrackLoaderFrame$4.run(TrackProcessorChallengeTracksImporter.java:301)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:312)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:733)
at java.awt.EventQueue.access$200(EventQueue.java:103)
at java.awt.EventQueue$3.run(EventQueue.java:694)
at java.awt.EventQueue$3.run(EventQueue.java:692)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:703)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:242)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:161)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:150)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:146)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:138)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:91)