Need help or advice ? Come to the Icy club ! - Every Wenesday morning from 9h30 to 12h30 - Francois Jacob Building - Main hall - Pasteur
Register

User reviews

(1)
5 star
1
4 star
0
3 star
0
2 star
0
1 star
0
average rating: 5


Please log-in to post a review
IcyLyd
13 Oct 2013 02:09
Very usefull to set threshold manually or automatically using protocols. The export in color coded ROI is great and visual.

HK-Means

by Alexandre Dufour

This segmentation method performs a N-class thresholding based on a K-Means classification of the image histogram, then extracts objects in a bottom-up manner using user-defined minimum and maximum object sizes. Very useful to detect clustered objects in fluorescence microscopy.

Publication Id
ICY-V4N7Q1
See technical details
View complete changelog

Documentation

Original publication:
A. Dufour, V. Meas-Yedid, A. Grassart, and J.-C. Olivo-Marin, "Automated Quantification of Cell Endocytosis Using Active Contours and Wavelet", Proc. ICPR 2008, Tampa, FL, USA.