Marine benthic ID applications

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  • Nigel Keeley

    Hi, I am new to Icy and interested in identifying certain objects (principally by hue) on the seabed from still images – and automating the process as I have 100’s of images. I need to the both number and size (in pixels) of the objects / shapes – much like seems to be the case with biological cells, e.g. Thresholds? Can anyone possibly recommend a plug in / script / process for that?

    Marion Louveaux

    Dear Nigel Keeley

    We migrated on the image.sc forum and this forum is now closed. You can get more info here.

    Could you please re-post your question on the image.sc forum and in the optionnal tags, write “icy”? This way the Icy team, but also the whole bioimage analysis community can help you and benefit from the answer.

    When re-posting, could also upload an example of image you would like to process?

    As you say that you are new to image analysis and Icy in particular, I take the opportunity to mention the webinar I made for NEUBIAS Academy @home on Icy:

    Video
    Slides
    Q&A

    Many thanks in advance and see you soon on the image.sc forum!

    Best regards,

    Marion, for the Icy team

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