Stephane Dallongeville

Image denoising based on fusing multiple Compressed Sensing (CS) reconstructions, taking advantage of the robustness of [..]

This plugin will compute the intensity profil of ROI contour along Z (3D) and T (timelaps) dimension. It generates a wor [..]

Angle descriptor for ROI (Region of Interest). It computes the angle (in degree) for PolyLine type ROI (only 3 points P [..]

This plugin add blocks (Protocols) for the Spot Tracking plugin. These following blocks can be used : – estimate p [..]

This plugin / block allow to convert a DetectionResult object containing a set of Detection into a set of ROI.

This plugin / block allow to convert a set of ROI into a DetectionResult object containing a set of Detection.

Allows to use Micro-Manager for Icy features inside Protocols.

Display the colormap over the image using an overlay. Some settings are available as position, scale and labels...

Simple usage example for the Webcam Capture library.

Webcam Capture library for Icy. This library allow easy access to webcam from Icy. You can see an example with the Web [..]

BridJ library for Icy. https://code.google.com/p/bridj/

Set of block (for graphical programming with Protocols) to perform different operations on ROI (Region Of Interest).

This plugin allows Icy to open many different video file format using the Xuggler library. Here is an incomplete list [..]

Stereo vision support added to the 3D VTK canvas.

Block (Protocols) to convert ROI(s) into a binary image / sequence.

This plugin allows you to create a private repository to distribute your plugins and workspaces from your own server.

Deprecated: Use the Xuggler Video Importer plugin instead ! This plugin should import any kind of video.

Used to be the micro manager libraries but now that is an empty plugin (provided for backward compatibility).

Library used by Micro-Manager for fast acquisition.

A tool to parse the javadoc of a file. Mostly used now by the Script Editor.

This library is used for JavaScript in the Scripting Editor. It is integrated in Java 6 & 7 by default, but for a better [..]

This plugin provides a color highlighting on text. Based on RSyntaxTextArea library of Fifesoft.

Plugin Library used to provide autocompletion to JTextComponents, such as JTextArea or JTextField.

Create powerful scripts to implement what's missing with plugins. Syntax Color and Autocomplete features implemented (st [..]

Deprecated ! Use the new Micro-Manager blocks plugin.

This plugin allows one to use various basic sequence operations within Blocks.

Displays a scale bar overlay on the sequence. Be advised, this plugin needs correct Metadata on the sequence to be effec [..]

Display your data in real time 3D (depending on your hardware).

Creates an overlay on which you can draw. This can also be used to generate specific data (for tests).

Record what you are doing on a sequence as a .avi file, fully compatible with Icy.

Displays a live tool tip on the current focused ROI in an image. The tooltip displays the following informations abou [..]

The right click on sequences and ROIs will open a menu with various features, such as image and ROI copy, data conversio [..]

Fast Fourier Transform (FFT) for 2D/3D images

Simple tool to add annotations on your images.

Edit the workspaces with a simple drag'n drop system (Requires Icy 1.2 at least).

Calibrator for Pixel Size.

Manage all calibrators for your microscope.

Advanced Acquisition plugin for microscope.

Snap complex images easily.

Move your XY Stage and Focus Device with your mouse.

Live video plugin for Micro-Manager for Icy.

Micro-Manager plugin for Icy. Use your microscope and microscopic devices in Icy ! Compatible with Micro-Manager 1.4.19 [..]

Simple particles animation. Up to 100 000 particles following the mouse cursor movement.

Image segmentation by representative colors selection. Two versions are available : - thresholding - positive and nega [..]