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Spots detection and colocalisation analysis with SODA
Detection and Tracking of neurons with EMC2
var total_items = 3;

Nuclei segmentation from maximum intensity projections

protocol
Marion Louveaux

Project 3D stacks in 2D (maximum intensity projection along Z axis) and segments nuclei stained with Hoechst. [..]

clicy

plugin
Robert Haase

Bridging Icy and clij

TubeSkinner

plugin
Sebastien Herbert
Jean-Yves Tinevez
Fabrice de Chaumont
Sebastien Herbert
Jean-Yves Tinevez
Fabrice de Chaumont

TubeSkinner is a dimensionality reduction tool, that maps the fluorescence intensity over a 3D tubular structure onto a 2D plane. On the 2D unwrapped [..]

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